RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 OPN1LWP04000 364 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 AVPR2P30518 371 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 RPS27P42677 84 aaKnown RBP13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 TMEM225Q6GV28 225 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 C11orf87Q6NUJ2 197 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 SLC22A25Q6T423 547 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 PNPLA2Q96AD5 504 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 AKR1E2Q96JD6 320 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 PRRG4Q9BZD6 226 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 BCL2L10Q9HD36 194 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 FAM221BA6H8Z2 402 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 NUDT19A8MXV4 375 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 PLPP2O43688 288 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 NME2P1O60361 137 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 TAGLN2P37802 199 aaKnown RBP13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 TNFRSF4P43489 277 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 NPY4RP50391 375 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 PPA1Q15181 289 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 TMEM196Q5HYL7 178 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 OR1J2Q8NGS2 313 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 SLCO5A1Q9H2Y9 848 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 VDAC3Q9Y277 283 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 GPR55Q9Y2T6 319 aaPredicted RBP13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 OR2W5A6NFC9 320 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 H3BML4 177 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 PMP2P02689 132 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 GALP22466 123 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 SLC26A5P58743 744 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 IAH1Q2TAA2 248 aaPredicted RBP13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 SLC22A6Q4U2R8 563 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 ALKBH2Q6NS38 261 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 AKR7LQ8NHP1 331 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 EHFQ9NZC4 300 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 LINC01565O15544 149 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 CTNSO60931 367 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 RFC3P40938 356 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 SERTAD2Q14140 314 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 FAM109BQ6ICB4 259 aaPredicted RBP13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 ZNF440Q8IYI8 595 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 RSPRY1Q96DX4 576 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 LRRC3BQ96PB8 259 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 DHCR7Q9UBM7 475 aaKnown RBP13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 FAM230AA0A1W2PPH8 454 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 UMAD1C9J7I0 102 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 ZNF41P51814 821 aaPredicted RBP13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 HTRA4P83105 476 aaPredicted RBP13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 MPEG1Q2M385 716 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 ZNF704Q6ZNC4 412 aaPredicted RBP13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 MDGA2Q7Z553 956 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 MRPL41Q8IXM3 137 aaKnown RBP13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 SYS1Q8N2H4 156 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 GALNT16Q8N428 558 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 TMEM234Q8WY98 164 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 HAS2Q92819 552 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 RSRP1Q9BUV0 290 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 EXOSC3Q9NQT5 275 aaKnown RBP13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 PCYT1BQ9Y5K3 369 aaPredicted RBP13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 ZNF638Q14966 1978 aaKnown RBP13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 SPTBP11277 2137 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 LY86O95711 162 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 SULF2Q8IWU5 870 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 OR4D11Q8NGI4 311 aa13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 ZNF707Q96C28 371 aaPredicted RBP13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 FAM71F1Q96KD3 344 aaPredicted RBP13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 GAR1Q9NY12 217 aaKnown RBP13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 UBE2J1Q9Y385 318 aaPredicted RBP13.31□□□□□ -0.28
RPRD1A-202ENST00000399022 ANK1P16157 1881 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 MEP1BQ16820 701 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 ELFN2Q5R3F8 820 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 RNLSQ5VYX0 342 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 OR51T1Q8NGJ9 327 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 KCND3Q9UK17 655 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 TMEM269A0A1B0GVZ9 245 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 MFSD2BA6NFX1 497 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 RNASEK-C17orf49H0YIS7 233 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 ZNF354AO60765 605 aaPredicted RBP13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 ENPP1P22413 925 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 MAMDC2Q7Z304 686 aaPredicted RBP13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 SKA3Q8IX90 412 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 ATOH1Q92858 354 aaPredicted RBP13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 NRSN2Q9GZP1 204 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 C6orf106Q9H6K1 298 aaPredicted RBP13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 MYO16Q9Y6X6 1858 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 PTPRZ1P23471 2315 aaPredicted RBP13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 CCDC163A0A0D9SF12 145 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 OTOL1A6NHN0 477 aaPredicted RBP13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 ADAM10O14672 748 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 F12P00748 615 aaPredicted RBP13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 ACSM1Q08AH1 577 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 FAM69BQ5VUD6 431 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 MEX3BQ6ZN04 569 aaKnown RBP13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 STPG2Q8N412 459 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 TSSK2Q96PF2 358 aa13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 ELF4Q99607 663 aaPredicted RBP13.3□□□□□ -0.28
RPRD1A-202ENST00000399022 GREM1O60565 184 aa13.29□□□□□ -0.28
RPRD1A-202ENST00000399022 NTN1O95631 604 aa13.29□□□□□ -0.28
RPRD1A-202ENST00000399022 SFTA3P0C7M3 94 aa13.29□□□□□ -0.28
RPRD1A-202ENST00000399022 SMIM6P0DI80 62 aa13.29□□□□□ -0.28
RPRD1A-202ENST00000399022 CPN1P15169 458 aa13.29□□□□□ -0.28
RPRD1A-202ENST00000399022 RAB38P57729 211 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms