RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 TTTY10Q9BZA0 68 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 SEC61A2Q9H9S3 476 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 SF3B6Q9Y3B4 125 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 SHANK1Q9Y566 2161 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 CCDC160A6NGH7 325 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 METTL15A6NJ78 407 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 E9PI62 339 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 H3BMQ9 156 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 TMCC2O75069 709 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 WDR1O75083 606 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 GABRA1P14867 456 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 MSR1P21757 451 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 MRPL28Q13084 256 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 NRN1LQ496H8 165 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 FAM27BQ5VT28 67 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 LIPKQ5VXJ0 399 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 NUFIP2Q7Z417 695 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 P4HA3Q7Z4N8 544 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 TEX19Q8NA77 164 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 OR52N5Q8NH56 324 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 FAM57AQ8TBR7 257 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 THEM6Q8WUY1 208 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 UFD1Q92890 307 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 C12orf43Q96C57 262 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 SNRNP40Q96DI7 357 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 ALKBH3Q96Q83 286 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 RBM24Q9BX46 236 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 SLC25A18Q9H1K4 315 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 EMC7Q9NPA0 242 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 SLC7A10Q9NS82 523 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 TMEM38BQ9NVV0 291 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 GNG8Q9UK08 70 aa17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 SIRT4Q9Y6E7 314 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-205ENST00000397761 MBD3L4A6NDZ8 208 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 MBD3L3A6NE82 208 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 MBD3L5A6NJ08 208 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 OGG1O15527 345 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 PLPP2O43688 288 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 KRT8P05787 483 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 TACSTD2P09758 323 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 CD53P19397 219 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 NPR2P20594 1047 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 GADD45AP24522 165 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 TGM4P49221 684 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 GTF2A1P52655 376 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 KLRB1Q12918 225 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 EIF2B1Q14232 305 aaKnown RBP17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 DMKNQ6E0U4 476 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 OR2A2Q6IF42 318 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 KCTD18Q6PI47 426 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 DEGS2Q6QHC5 323 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 RHOUQ7L0Q8 258 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 ZNF627Q7L945 461 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 ZNF679Q8IYX0 411 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 MBD3L2Q8NHZ7 208 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 RNF133Q8WVZ7 376 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 TM9SF2Q99805 663 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 ACOXLQ9NUZ1 547 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 ST6GALNAC2Q9UJ37 374 aa17.16■□□□□ 0.34
PDLIM2-205ENST00000397761 CD1AP06126 327 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 HOXD4P09016 255 aaPredicted RBP17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 OR8G3PP0DMU2 310 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 SFTPCP11686 197 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 GUCA1AP43080 201 aaPredicted RBP17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 OR3A2P47893 321 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 GBX2P52951 348 aaPredicted RBP17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 HIST1H3AP68431 136 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 SIRPAP78324 504 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 ENDOGQ14249 297 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 CEACAM16Q2WEN9 425 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 CNPY1Q3B7I2 92 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 HIST2H3PS2Q5TEC6 136 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 RTL6Q6ICC9 239 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 FDX2Q6P4F2 183 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 HIST2H3AQ71DI3 136 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 DCXRQ7Z4W1 244 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 LINC00346Q8IVM7 164 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 C9orf106Q8NAJ2 232 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 MAP6Q96JE9 813 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 ZNF416Q9BWM5 594 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 SIAEQ9HAT2 523 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 SLCO1C1Q9NYB5 712 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 MALT1Q9UDY8 824 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 FAM215AQ9Y5M1 114 aa17.15■□□□□ 0.34
PDLIM2-205ENST00000397761 FIGNL2A6NMB9 653 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 AIREO43918 545 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 ZNF254O75437 659 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 WNT11O96014 354 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 CELP19835 753 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 GABRA5P31644 462 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 CRYBB2P43320 205 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 ROR2Q01974 943 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 TIMM50Q3ZCQ8 353 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 LIPNQ5VXI9 398 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 ZNF585AQ6P3V2 769 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 RPL22L1Q6P5R6 122 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 CD200R1LQ6Q8B3 271 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 GDPGP1Q6ZNW5 385 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 SEM1Q6ZVN7 128 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms