RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 GLIPR2Q9H4G4 154 aa5.84□□□□□ -1.47
SMCO1-201ENST00000397537 SEC61A2Q9H9S3 476 aa5.84□□□□□ -1.47
SMCO1-201ENST00000397537 TPSG1Q9NRR2 321 aa5.84□□□□□ -1.47
SMCO1-201ENST00000397537 DDX60Q8IY21 1712 aaKnown RBP5.84□□□□□ -1.47
SMCO1-201ENST00000397537 TVP23AA6NH52 213 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 OR2AT4A6NND4 320 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 PDHXO00330 501 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 IGSF6O95976 241 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 RBP1P09455 135 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 OPRD1P41143 372 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 BACE1P56817 501 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 NCALDP61601 193 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 PSPHP78330 225 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 HOXA4Q00056 320 aaPredicted RBP5.83□□□□□ -1.48
SMCO1-201ENST00000397537 CKAP4Q07065 602 aaKnown RBP5.83□□□□□ -1.48
SMCO1-201ENST00000397537 ILF3Q12906 894 aaKnown RBP eCLIP5.83□□□□□ -1.48
SMCO1-201ENST00000397537 MTF1Q14872 753 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 SHHQ15465 462 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 DDI2Q5TDH0 399 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 TIPARPQ7Z3E1 657 aaKnown RBP5.83□□□□□ -1.48
SMCO1-201ENST00000397537 OR2L13Q8N349 312 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 KIF2BQ8N4N8 673 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 OR5B17Q8NGF7 314 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 PHLDA1Q8WV24 401 aaPredicted RBP5.83□□□□□ -1.48
SMCO1-201ENST00000397537 AP3S1Q92572 193 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 TESCQ96BS2 214 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 CXorf40BQ96DE9 158 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 FBXO17Q96EF6 278 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 QKIQ96PU8 341 aaKnown RBP eCLIP5.83□□□□□ -1.48
SMCO1-201ENST00000397537 MCCC1Q96RQ3 725 aaPredicted RBP5.83□□□□□ -1.48
SMCO1-201ENST00000397537 PRRT1Q99946 306 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 RCL1Q9Y2P8 373 aaKnown RBP5.83□□□□□ -1.48
SMCO1-201ENST00000397537 MMACHCQ9Y4U1 282 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 ASB4Q9Y574 426 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 A0A087X1B8 175 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 CCL15-CCL14A0A0B4J2E2 113 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 KRTAP4-8A0A0G2JLE6 195 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 KIR2DS5A0A0G2JLQ3 304 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 LRIT2A6NDA9 550 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 ZNF487B1APH4 448 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 KIR2DS3K7RE56 304 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 DCTN6O00399 190 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 PRRG2O14669 202 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 CEACAM4O75871 244 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 UTS2O95399 124 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 IFNA4P05014 189 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 CRHP06850 196 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 ABOP16442 354 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 TNFSF9P41273 254 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 OR1D5P58170 312 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 RPL27P61353 136 aaKnown RBP5.83□□□□□ -1.48
SMCO1-201ENST00000397537 CCL15Q16663 113 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 DUSP6Q16828 381 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 S100A7AQ86SG5 101 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 PEG10Q86TG7 708 aaKnown RBP5.83□□□□□ -1.48
SMCO1-201ENST00000397537 ZNF547Q8IVP9 402 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 LRRC52Q8N7C0 313 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 OR52H1Q8NGJ2 320 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 OR52N5Q8NH56 324 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 CREB3L1Q96BA8 519 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 ZBED6CLQ96FA7 236 aaPredicted RBP5.83□□□□□ -1.48
SMCO1-201ENST00000397537 C4orf45Q96LM5 186 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 MRPS26Q9BYN8 205 aaKnown RBP5.83□□□□□ -1.48
SMCO1-201ENST00000397537 ELOVL4Q9GZR5 314 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 MAP6D1Q9H9H5 199 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 ACP6Q9NPH0 428 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 AGPAT4Q9NRZ5 378 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 LSM7Q9UK45 103 aaKnown RBP5.83□□□□□ -1.48
SMCO1-201ENST00000397537 POU2F3Q9UKI9 436 aa5.83□□□□□ -1.48
SMCO1-201ENST00000397537 DDX60LQ5H9U9 1706 aaKnown RBP5.82□□□□□ -1.48
SMCO1-201ENST00000397537 MED23Q9ULK4 1368 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 C5orf42Q9H799 3197 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 TRBV7-9A0A0J9YWB2 115 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 FAM92AA1XBS5 289 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 E9PAM4 449 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 LOC110117498-PIK3R3F6TDL0 507 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 DPM1O60762 260 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 MED6O75586 246 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 GJB5O95377 273 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 TCRBP04435 133 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 S100A8P05109 93 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 COX4I1P13073 169 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 ITGB7P26010 798 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 PSME3P61289 254 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 RPS18P62269 152 aaKnown RBP5.82□□□□□ -1.48
SMCO1-201ENST00000397537 DOC2BQ14184 412 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 DPYSL3Q14195 570 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 TMED2Q15363 201 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 UPP1Q16831 310 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 TRMT5Q32P41 509 aaKnown RBP5.82□□□□□ -1.48
SMCO1-201ENST00000397537 FFAR4Q5NUL3 377 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 ACER2Q5QJU3 275 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 IRAK1BP1Q5VVH5 260 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 SPESP1Q6UW49 350 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 APTXQ7Z2E3 356 aaKnown RBP5.82□□□□□ -1.48
SMCO1-201ENST00000397537 CLIP4Q8N3C7 705 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 TMEM251Q8N6I4 163 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 OR5H6Q8NGV6 325 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 ACER1Q8TDN7 264 aa5.82□□□□□ -1.48
SMCO1-201ENST00000397537 IGFBPL1Q8WX77 278 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms