RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 XPNPEP2O43895 674 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 FMO6PO60774 539 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 SLC22A3O75751 556 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 TGDSO95455 350 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 IDO1P14902 403 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 TNFSF4P23510 183 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 GDI2P50395 445 aaKnown RBP7.86□□□□□ -1.15
NEDD9-203ENST00000397378 CLRN1P58418 232 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 MRPS34P82930 218 aaKnown RBP7.86□□□□□ -1.15
NEDD9-203ENST00000397378 DBPQ10586 325 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-203ENST00000397378 HNRNPA0Q13151 305 aaKnown RBP7.86□□□□□ -1.15
NEDD9-203ENST00000397378 ZNF74Q16587 644 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 C6orf10Q5SRN2 563 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 HHATQ5VTY9 493 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 REEP3Q6NUK4 255 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 ZNF774Q6NX45 483 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 ZNF613Q6PF04 617 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 RFPL4BQ6ZWI9 263 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 RANBP3LQ86VV4 465 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-203ENST00000397378 POU5F2Q8N7G0 328 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 THOC1Q96FV9 657 aaKnown RBP7.86□□□□□ -1.15
NEDD9-203ENST00000397378 ZNF347Q96SE7 839 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 PAIP1Q9H074 479 aaKnown RBP7.86□□□□□ -1.15
NEDD9-203ENST00000397378 ELOVL3Q9HB03 270 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 CCNB1IP1Q9NPC3 277 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 SLCO1B3Q9NPD5 702 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 NANSQ9NR45 359 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 PNPOQ9NVS9 261 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 ZIM2Q9NZV7 527 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-203ENST00000397378 IL19Q9UHD0 177 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 POMT1Q9Y6A1 747 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 KIR2DS1A0A191URI9 304 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 C3orf84H3BNL1 204 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 TMEM178BH3BS89 294 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 K7EIL1 84 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 IFNL4K9M1U5 179 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 CHP2O43745 196 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 TIMM8AO60220 97 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-203ENST00000397378 GPR137BO60478 399 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 MELTFP08582 738 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 ASAH2BP0C7U1 165 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 ZNF32P17041 273 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 HOXB9P17482 250 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-203ENST00000397378 FUT4P22083 530 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 EPHA3P29320 983 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 CDK6Q00534 326 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 PSG4Q00888 419 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 PSG7Q13046 419 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 STX3Q13277 289 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 KLHL22Q53GT1 634 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 CEP85LQ5SZL2 805 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 FOXB2Q5VYV0 432 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 Q6ZTK2 550 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 HDDC2Q7Z4H3 204 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 NOXO1Q8NFA2 376 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 NFKBIDQ8NI38 313 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 VANGL1Q8TAA9 524 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-203ENST00000397378 ABHD4Q8TB40 342 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 GTF2H4Q92759 462 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 NABP1Q96AH0 204 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 PLEKHA8Q96JA3 519 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 FAM71F1Q96KD3 344 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-203ENST00000397378 WFDC6Q9BQY6 131 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 OCSTAMPQ9BR26 566 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 WDR55Q9H6Y2 383 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-203ENST00000397378 SMURF2Q9HAU4 748 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 SDR39U1Q9NRG7 319 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-203ENST00000397378 MAN2C1Q9NTJ4 1040 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 MIOXQ9UGB7 285 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 ZNF229Q9UJW7 825 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 PPP1R3CQ9UQK1 317 aa7.85□□□□□ -1.15
NEDD9-203ENST00000397378 RYR2Q92736 4967 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 TRPC5OSA6NMA1 111 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 SURF4O15260 269 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 GPR37O15354 613 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 HDAC3O15379 428 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 SERPINB7O75635 380 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 TRMUO75648 421 aaKnown RBP7.84□□□□□ -1.15
NEDD9-203ENST00000397378 FSTL3O95633 263 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 CH25HO95992 272 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 HIST1H2ABP04908 130 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 SFTPBP07988 381 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 ACADSP16219 412 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 KITLGP21583 273 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 BGNP21810 368 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 TUBG1P23258 451 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 POLR2JP52435 117 aaKnown RBP7.84□□□□□ -1.15
NEDD9-203ENST00000397378 ARHGDIAP52565 204 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 GNB2P62879 340 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 EGR3Q06889 387 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 IFFO1Q0D2I5 559 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 GCNT6Q5T4J0 391 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 GPR157Q5UAW9 335 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 FAM27BQ5VT28 67 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 Q6ZR03 302 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 Q6ZSV7 163 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 HIST3H2AQ7L7L0 130 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 KLBQ86Z14 1044 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 ALDH16A1Q8IZ83 802 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms