RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 MRPL19P49406 292 aaKnown RBP11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 IDH3AP50213 366 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 CLDN8P56748 225 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 COX10Q12887 443 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 NRN1LQ496H8 165 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 MTX3Q5HYI7 312 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 SLC27A4Q6P1M0 643 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 C5orf46Q6UWT4 87 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 RFPL4BQ6ZWI9 263 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 SERPINA11Q86U17 422 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 SCAIQ8N9R8 606 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 OR4K5Q8NGD3 323 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 OR6S1Q8NH40 331 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 AGR3Q8TD06 166 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 TUBGCP3Q96CW5 907 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 NEIL1Q96FI4 390 aaPredicted RBP11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 TMEM246Q9BRR3 403 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 TRIM15Q9C019 465 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 C1orf21Q9H246 121 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 LRMDAQ9H2I8 198 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 C12orf10Q9HB07 376 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 GLTPQ9NZD2 209 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 PPP1R3CQ9UQK1 317 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 LOC100509620A0A075B734 347 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 ZNF879B4DU55 563 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 RNASEK-C17orf49H0YIS7 233 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 BGLAPP02818 100 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 G6PDP11413 515 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 PCBP3P57721 371 aaKnown RBP11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 KRTAP10-11P60412 298 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 EMX2Q04743 252 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 CD69Q07108 199 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 PGS1Q32NB8 556 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 ZNF404Q494X3 552 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 SLC36A2Q495M3 483 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 LIN52Q52LA3 116 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 ZMAT1Q5H9K5 638 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 WDR25Q64LD2 544 aaPredicted RBP11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 PXKQ7Z7A4 578 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 ARHGAP24Q8N264 748 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 MIER2Q8N344 545 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 C11orf44Q8N8P7 122 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 ITLN1Q8WWA0 313 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 SLC38A4Q969I6 547 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 NSL1Q96IY1 281 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 PLEKHA8Q96JA3 519 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 RAB3IPQ96QF0 476 aaPredicted RBP11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 PCGF1Q9BSM1 259 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 SLC19A3Q9BZV2 496 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 MMP28Q9H239 520 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 DPAGT1Q9H3H5 408 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 GCM1Q9NP62 436 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 PNPOQ9NVS9 261 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 NDE1Q9NXR1 346 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 ASIC5Q9NY37 505 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 NOP53Q9NZM5 478 aaKnown RBP11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 MARCOQ9UEW3 520 aaPredicted RBP11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 IL19Q9UHD0 177 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 SIGLEC9Q9Y336 463 aa11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 RRP15Q9Y3B9 282 aaKnown RBP11.29□□□□□ -0.6
VCPKMT-201ENST00000395859 TRAV36DV7A0A075B6V5 113 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 PRSS51A0A1B0GVH4 220 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 IQCMA0A1B0GVH7 501 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 ZNF726A6NNF4 738 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 PHYHO14832 338 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 ENTPD5O75356 428 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 KITP10721 976 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 AHCYP23526 432 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 SLC6A2P23975 617 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 PITPNBP48739 271 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 PUDPQ08623 228 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 PSG7Q13046 419 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 MAPRE2Q15555 327 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 OGFOD2Q6N063 350 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 SLC16A14Q7RTX9 510 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 ANKRD46Q86W74 232 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 PEX5LQ8IYB4 626 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 OR4S1Q8NGB4 309 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 OR52P1PQ8NH57 321 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 OR6X1Q8NH79 312 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 VANGL1Q8TAA9 524 aaPredicted RBP11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 SIRPDQ9H106 197 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 RNF121Q9H920 327 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 MRPL39Q9NYK5 338 aaKnown RBP11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 ZNRD1Q9P1U0 126 aa11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 ZNF443Q9Y2A4 671 aaPredicted RBP11.28□□□□□ -0.6
VCPKMT-201ENST00000395859 FRAS1Q86XX4 4008 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 PLPP3O14495 311 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 ENSAO43768 121 aaKnown RBP11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 ZNF205O95201 554 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 FARS2O95363 451 aaKnown RBP11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 NCF2P19878 526 aaPredicted RBP11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 CBLP22681 906 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 STOMP27105 288 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 EPHA3P29320 983 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 GABRA5P31644 462 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 APLNRP35414 380 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 HOXC5Q00444 222 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 DOC2BQ14184 412 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 PABPC1L2AQ5JQF8 200 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms