RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 DANCRP0C864 163 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 ZNF32P17041 273 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 POLR2IP36954 125 aaKnown RBP14.35□□□□□ -0.11
CXCL1-201ENST00000395761 GUCA1AP43080 201 aaPredicted RBP14.35□□□□□ -0.11
CXCL1-201ENST00000395761 HGFACQ04756 655 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 ENDOGQ14249 297 aaKnown RBP14.35□□□□□ -0.11
CXCL1-201ENST00000395761 PTGES3Q15185 160 aaKnown RBP14.35□□□□□ -0.11
CXCL1-201ENST00000395761 PGGHGQ32M88 737 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 TMEM53Q6P2H8 277 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 DPPA2Q7Z7J5 298 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 GLB1L2Q8IW92 636 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 CYB561A3Q8NBI2 242 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 OR2T33Q8NG76 320 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 TEX47Q8TBZ9 253 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 SMAP2Q8WU79 429 aaPredicted RBP14.35□□□□□ -0.11
CXCL1-201ENST00000395761 IGFBPL1Q8WX77 278 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 NINJ1Q92982 152 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 SNX18Q96RF0 628 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 MBOAT4Q96T53 435 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 ZNF416Q9BWM5 594 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 KCNN2Q9H2S1 579 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 FAM118AQ9NWS6 357 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 EDARQ9UNE0 448 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 CCDC168Q8NDH2 2452 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 FAM171A2A8MVW0 826 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 SERPINA5P05154 406 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 CST2P09228 141 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 MSR1P21757 451 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 EPHA2P29317 976 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 CRABP1P29762 137 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 CENPAP49450 140 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 GINS1Q14691 196 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 ZIK1Q3SY52 487 aaPredicted RBP14.34□□□□□ -0.11
CXCL1-201ENST00000395761 PABPC1L2AQ5JQF8 200 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 ACSM5Q6NUN0 579 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 SLC27A4Q6P1M0 643 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 DHRSXQ8N5I4 330 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 SLC37A3Q8NCC5 494 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 CPEB3Q8NE35 698 aaKnown RBP14.34□□□□□ -0.11
CXCL1-201ENST00000395761 AKR7LQ8NHP1 331 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 HRASLS5Q96KN8 279 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 CCL19Q99731 98 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 DHRS9Q9BPW9 319 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 KCNS3Q9BQ31 491 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 CCNB1IP1Q9NPC3 277 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 LAMP3Q9UQV4 416 aa14.34□□□□□ -0.11
CXCL1-201ENST00000395761 HEATR1Q9H583 2144 aaKnown RBP14.33□□□□□ -0.11
CXCL1-201ENST00000395761 H0YAE9 185 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 CD8AP01732 235 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 CCL2P13500 99 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 ZNF35P13682 527 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 HSPA13P48723 471 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 AQP4P55087 323 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 ADARB1P78563 741 aaKnown RBP14.33□□□□□ -0.12
CXCL1-201ENST00000395761 PSG4Q00888 419 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 MEP1BQ16820 701 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 SLX4IPQ5VYV7 408 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 TTC23Q5W5X9 447 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 ZBTB46Q86UZ6 589 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 IL17RDQ8NFM7 739 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 ZNRF4Q8WWF5 429 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 C11orf40Q8WZ69 217 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 PITX2Q99697 317 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 OR2H1Q9GZK4 316 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 WNT5BQ9H1J7 359 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 RIBC2Q9H4K1 309 aa14.33□□□□□ -0.12
CXCL1-201ENST00000395761 NDRG4Q9ULP0 352 aaKnown RBP14.33□□□□□ -0.12
CXCL1-201ENST00000395761 LOC100130705A0A1B0GUX0 176 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 HMGN1P05114 100 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 GAAP10253 952 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 APEX1P27695 318 aaKnown RBP14.32□□□□□ -0.12
CXCL1-201ENST00000395761 PYCR1P32322 319 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 TTKP33981 857 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 GRK5P34947 590 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 FABP6P51161 128 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 EFNB1P98172 346 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 HSF2Q03933 536 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 CRMP1Q14194 572 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 KCNMB1Q16558 191 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 DEFB113Q30KQ7 82 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 TMEM236Q5W0B7 351 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 C12orf73Q69YU5 71 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 KRT80Q6KB66 452 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 DNM1P34Q6PK57 102 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 IZUMO2Q6UXV1 221 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.32□□□□□ -0.12
CXCL1-201ENST00000395761 PAQR4Q8N4S7 273 aaPredicted RBP14.32□□□□□ -0.12
CXCL1-201ENST00000395761 SLC30A7Q8NEW0 376 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 OR4F15Q8NGB8 312 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 TFAP2CQ92754 450 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 PIGTQ969N2 578 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 MBD6Q96DN6 1003 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 TEX12Q9BXU0 123 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 RACGAP1Q9H0H5 632 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 KLHL21Q9UJP4 597 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 FBXL3Q9UKT7 428 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 TIMM10BQ9Y5J6 103 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 FKBP7Q9Y680 259 aa14.32□□□□□ -0.12
CXCL1-201ENST00000395761 OTOGQ6ZRI0 2925 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 MYO9AB2RTY4 2548 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms