RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 ABHD6Q9BV23 337 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 COMMD4Q9H0A8 199 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 RALGAPA1Q6GYQ0 2036 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 RAD1O60671 282 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 CELA2AP08217 269 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 POU3F1Q03052 451 aaPredicted RBP12.5□□□□□ -0.41
SNCA-204ENST00000394989 GLO1Q04760 184 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 KLF9Q13886 244 aaPredicted RBP12.5□□□□□ -0.41
SNCA-204ENST00000394989 AANATQ16613 207 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 OR11H7Q8NGC8 314 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 RNF128Q8TEB7 428 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 ASB17Q8WXJ9 295 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 KCNK17Q96T54 332 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 MRPL15Q9P015 296 aaKnown RBP12.5□□□□□ -0.41
SNCA-204ENST00000394989 PPP4R1LQ9P1A2 415 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 FBXL2Q9UKC9 423 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 WIF1Q9Y5W5 379 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 IGLV3-32A0A0A0MS00 114 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 LIPT2A6NK58 231 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 GPR171O14626 319 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 RGS11O94810 467 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 FBXO45P0C2W1 286 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 CCKBRP32239 447 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 ARHGDIBP52566 201 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 MFSD13AQ14CX5 517 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 OR7E24Q6IFN5 339 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 DND1Q8IYX4 353 aaKnown RBP12.49□□□□□ -0.41
SNCA-204ENST00000394989 SLC26A10Q8NG04 563 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 ELP5Q8TE02 316 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 DDIT4LQ96D03 193 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 NTN3O00634 580 aaPredicted RBP12.49□□□□□ -0.41
SNCA-204ENST00000394989 RAF1P04049 648 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 CCL4P13236 92 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 PTH2RP49190 550 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 BLVRAP53004 296 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 RAB14P61106 215 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 TLE3Q04726 772 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 PCOLCEQ15113 449 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 SLC25A53Q5H9E4 307 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 BAIAP2L2Q6UXY1 529 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 PIAS4Q8N2W9 510 aaPredicted RBP12.49□□□□□ -0.41
SNCA-204ENST00000394989 DEFB123Q8N688 67 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 SYNPRQ8TBG9 265 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 CHST11Q9NPF2 352 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 B3GAT1Q9P2W7 334 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 LRP12Q9Y561 859 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 EML6Q6ZMW3 1958 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 TEX51A0A1B0GUA7 166 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 SRSF10O75494 262 aaKnown RBP12.49□□□□□ -0.41
SNCA-204ENST00000394989 TMIGD3P0DMS9 266 aaPredicted RBP12.49□□□□□ -0.41
SNCA-204ENST00000394989 CALCBP10092 127 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 CRABP1P29762 137 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 CCR6P51684 374 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 CCR9P51686 369 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 HSF1Q00613 529 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 EIF2B1Q14232 305 aaKnown RBP12.49□□□□□ -0.41
SNCA-204ENST00000394989 IL11RAQ14626 422 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 NHLRC1Q6VVB1 395 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 TMPRSS12Q86WS5 348 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 ZNF248Q8NDW4 579 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 OR5M1Q8NGP8 315 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 SLITRK2Q9H156 845 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 METTL7AQ9H8H3 244 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 FOXJ3Q9UPW0 622 aa12.49□□□□□ -0.41
SNCA-204ENST00000394989 YKT6O15498 198 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 LAMTOR5O43504 91 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 ZNF432O94892 652 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 OPN1LWP04000 364 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 UMODP07911 640 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 PTHLHP12272 177 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 GIFP27352 417 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 GDNFP39905 211 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 BTG1P62324 171 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 MYBPHQ13203 477 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 LINGO2Q7L985 606 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 WDSUB1Q8N9V3 476 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 MRGPRX4Q96LA9 322 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 AIFM2Q9BRQ8 373 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 WDR54Q9H977 334 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 DIABLOQ9NR28 239 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 C19orf25Q9UFG5 118 aaPredicted RBP12.48□□□□□ -0.41
SNCA-204ENST00000394989 FBXL3Q9UKT7 428 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 ZDBF2Q9HCK1 2354 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 NPIPA5E9PKD4 350 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 TMEM127O75204 238 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 MT-ND4P03905 459 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 TCRBP04435 133 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 ZNF41P51814 821 aaPredicted RBP12.48□□□□□ -0.41
SNCA-204ENST00000394989 KRT77Q7Z794 578 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 GLB1L2Q8IW92 636 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 SPACA9Q96E40 222 aaPredicted RBP12.48□□□□□ -0.41
SNCA-204ENST00000394989 LINC00052Q96N35 136 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 EMC6Q9BV81 110 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 TMEM185BQ9H7F4 350 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 FANCFQ9NPI8 374 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 NPIPA1Q9UND3 350 aa12.48□□□□□ -0.41
SNCA-204ENST00000394989 CHCHD2Q9Y6H1 151 aaPredicted RBP12.48□□□□□ -0.41
SNCA-204ENST00000394989 NPIPB13A6NJU9 1138 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 NPIPB4C9JG80 1138 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 SSNA1O43805 119 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms