RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TSPAN2O60636 221 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 ALOX12BO75342 701 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 CSN2P05814 226 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 MAPK3P27361 379 aaPredicted RBP12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 EIF2B1Q14232 305 aaKnown RBP12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 ZNF574Q6ZN55 896 aaPredicted RBP12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 OR1J4Q8NGS1 313 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 ZNF519Q8TB69 540 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 MVB12AQ96EY5 273 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 WBP1Q96G27 269 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 ABHD6Q9BV23 337 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 ZNF230Q9UIE0 474 aaPredicted RBP12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 TRAV36DV7A0A075B6V5 113 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 FXYD6-FXYD2A0A087WZ82 144 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 A0A1B0GX78 115 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 NAP1L6A6NFF2 107 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 MCRIP1C9JLW8 97 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 L7N2F9 121 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 OR6A2O95222 327 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 IFNA7P01567 189 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 GALNSP34059 522 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 EGR3Q06889 387 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 CLLU1Q5K131 121 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 GLYATL3Q5SZD4 288 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 DNM1P46Q6ZS02 220 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 RNF144BQ7Z419 303 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 GALNT16Q8N428 558 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 TINAGL1Q9GZM7 467 aaPredicted RBP12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 VN1R1Q9GZP7 353 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 WWTR1Q9GZV5 400 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 FXYD6Q9H0Q3 95 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 AKAP7Q9P0M2 348 aaPredicted RBP12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 FBXO4Q9UKT5 387 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 EMC9Q9Y3B6 208 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 LRP12Q9Y561 859 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 ETV7Q9Y603 341 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 KIF26BQ2KJY2 2108 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 TCRBV16S1A1N1A0A5B0 115 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 SLC22A23A1A5C7 686 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 ADAM10O14672 748 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 PRAF2O60831 178 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 ANOS1P23352 680 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 AP2S1P53680 142 aaPredicted RBP12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 RPL27P61353 136 aaKnown RBP12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 ELAVL1Q15717 326 aaKnown RBP12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 ZNF627Q7L945 461 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 KRT77Q7Z794 578 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 ASB5Q8WWX0 329 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 NKD1Q969G9 470 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 CMBLQ96DG6 245 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 SLC7A5P2Q9GIP4 190 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 MED29Q9NX70 200 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 COL5A1P20908 1838 aaPredicted RBP12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 A0A1W2PPC1 479 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 SIGLEC5O15389 551 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 SLC25A12O75746 678 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 GP1BBP13224 206 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 EIF1AXP47813 144 aaKnown RBP12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 SIGLEC14Q08ET2 396 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 RAB11BQ15907 218 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 SLC22A6Q4U2R8 563 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 DMRTC1Q5HYR2 192 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 TMEM225Q6GV28 225 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 WDR74Q6RFH5 385 aaPredicted RBP12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 PRSS42Q7Z5A4 293 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 OR2I1PQ8NGU4 316 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 COQ8AQ8NI60 647 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 SLC25A28Q96A46 364 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 PTTG3PQ9NZH4 202 aa12.09□□□□□ -0.47
GTF2F1-201ENST00000394456 LOC100509620A0A075B734 347 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 LGALS8O00214 317 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 SHOXO15266 292 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 OR2A4O95047 310 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 TIAF1O95411 115 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 NFYAP23511 347 aaPredicted RBP12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 EPHA8P29322 1005 aaPredicted RBP12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 NR0B2Q15466 257 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 EMC4Q5J8M3 183 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 C1orf140Q5VVS0 124 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 HLA-DQA1Q5Y7H0 255 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 TMED4Q7Z7H5 227 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 ZNF679Q8IYX0 411 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 SPICQ8N5J4 248 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 SLC38A9Q8NBW4 561 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 OR4S1Q8NGB4 309 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 MAFAQ8NHW3 353 aaPredicted RBP12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 OR2A7Q96R45 310 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 TMEM138Q9NPI0 162 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 OPN4Q9UHM6 478 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 LOC105371267A0A1B0GV96 52 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 WIPF3A6NGB9 483 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 IGF2P01344 180 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 ZNF28P17035 718 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 FOXK1P85037 733 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 RASGEF1BQ0VAM2 473 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 HLXQ14774 488 aaPredicted RBP12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 FAM69BQ5VUD6 431 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 LRFN4Q6PJG9 635 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 MAMDC2Q7Z304 686 aaPredicted RBP12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 CARFQ8N187 725 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms