RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 CYHR1Q6ZMK1 362 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 UTP4Q969X6 686 aaKnown RBP12.39□□□□□ -0.43
USP49-203ENST00000394253 CMBLQ96DG6 245 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 HRASLS5Q96KN8 279 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 PARP12Q9H0J9 701 aaKnown RBP12.39□□□□□ -0.43
USP49-203ENST00000394253 CYB5R1Q9UHQ9 305 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 TNFRSF1BP20333 461 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 SLC5A2P31639 672 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 KHDC1LQ5JSQ8 128 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 ENTPD8Q5MY95 495 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 PM20D1Q6GTS8 502 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 VDAC3Q9Y277 283 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 A0A1B0GTW7 788 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 DRGXA6NNA5 263 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 FAM87AP0C7U9 286 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 IDUAP35475 653 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 RABIFP47224 123 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 CEACAM7Q14002 265 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 HIST3H3Q16695 136 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 EMG1Q92979 244 aaKnown RBP12.39□□□□□ -0.43
USP49-203ENST00000394253 RAB24Q969Q5 203 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 ARHGAP32A7KAX9 2087 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 TRDV1A0A1B0GX56 115 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 ALPLP05186 524 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 ICAM2P13598 275 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 LSRQ86X29 649 aaPredicted RBP12.39□□□□□ -0.43
USP49-203ENST00000394253 SPATA31A5Q5VU36 1347 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 SPATA31A7Q8IWB4 1347 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 SNRPBP14678 240 aaKnown RBP12.39□□□□□ -0.43
USP49-203ENST00000394253 SH3BP2P78314 561 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 RHOFQ9HBH0 211 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 CTDSP2O14595 271 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 MRPL33O75394 65 aaKnown RBP12.39□□□□□ -0.43
USP49-203ENST00000394253 FCGR2CP31995 323 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 OR6S1Q8NH40 331 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 FLVCR1Q9Y5Y0 555 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 N4BP2Q86UW6 1770 aaPredicted RBP12.39□□□□□ -0.43
USP49-203ENST00000394253 ZNF888P0CJ79 500 aaPredicted RBP12.39□□□□□ -0.43
USP49-203ENST00000394253 FABP2P12104 132 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 RPL12P30050 165 aaKnown RBP12.39□□□□□ -0.43
USP49-203ENST00000394253 SYPL2Q5VXT5 272 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 BPIFA4PQ86YQ2 179 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 GHSRQ92847 366 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 P4HTMQ9NXG6 502 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 LGI1O95970 557 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 COX6CP09669 75 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 SLC10A2Q12908 348 aaPredicted RBP12.38□□□□□ -0.43
USP49-203ENST00000394253 TPBGQ13641 420 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 HLA-BQ31612 363 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 SOWAHCQ53LP3 525 aaPredicted RBP12.38□□□□□ -0.43
USP49-203ENST00000394253 ZNF680Q8NEM1 530 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 RAB37Q96AX2 223 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 POM121Q96HA1 1249 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 M0R3E3 92 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 RGS13O14921 159 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 GLCEO94923 617 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 HTR1FP30939 366 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 PCNPQ8WW12 178 aaKnown RBP12.38□□□□□ -0.43
USP49-203ENST00000394253 XYLT2Q9H1B5 865 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 PRAMEF25A6NGN4 478 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 ZNF593O00488 134 aaPredicted RBP12.38□□□□□ -0.43
USP49-203ENST00000394253 FCN1O00602 326 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 S1PR4O95977 384 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 NOVA1P51513 510 aaKnown RBP12.38□□□□□ -0.43
USP49-203ENST00000394253 ARSDP51689 593 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 PRAMEF5Q5TYX0 476 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 PRAMEF6Q5VXH4 476 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 MISPQ8IVT2 679 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 NAGSQ8N159 534 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 C19orf47Q8N9M1 422 aaKnown RBP12.38□□□□□ -0.43
USP49-203ENST00000394253 SPNS1Q9H2V7 528 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 SUSD2Q9UGT4 822 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 FZD1Q9UP38 647 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 LRRK1Q38SD2 2015 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 SELEP16581 610 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 OR1D4P47884 311 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 DCAF7P61962 342 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 DRAM2Q6UX65 266 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 GABRG1Q8N1C3 465 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 ZFPM2Q8WW38 1151 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 C11orf68Q9H3H3 251 aaKnown RBP12.38□□□□□ -0.43
USP49-203ENST00000394253 GPR55Q9Y2T6 319 aaPredicted RBP12.38□□□□□ -0.43
USP49-203ENST00000394253 TECPR2O15040 1411 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 BSGP35613 385 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 PLP1P60201 277 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 CLEC12BQ2HXU8 276 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 SPANXN5Q5MJ07 72 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 ZNF738Q8NE65 137 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 DNAJC15Q9Y5T4 150 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 LEFTY1O75610 366 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 FGF4P08620 206 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 ABOP16442 354 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 BMP5P22003 454 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 OR1Q1Q15612 314 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 CELF2-AS1Q8N7Q2 184 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 PNPLA1Q8N8W4 532 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 OR10AD1Q8NGE0 317 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 GPX7Q96SL4 187 aaPredicted RBP12.38□□□□□ -0.43
USP49-203ENST00000394253 SNRPGP15A8MWD9 76 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 TBX18O95935 607 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms