RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 ZNF767PQ75MW2 155 aa15.04■□□□□ -0
SCN3B-202ENST00000392770 C20orf141Q9NUB4 165 aa15.04■□□□□ -0
SCN3B-202ENST00000392770 SLC5A6Q9Y289 635 aa15.04■□□□□ -0
SCN3B-202ENST00000392770 A0A1B0GV50 99 aa15.04■□□□□ -0
SCN3B-202ENST00000392770 ZNF705EA8MWA4 302 aaPredicted RBP15.04■□□□□ -0
SCN3B-202ENST00000392770 CDK5Q00535 292 aa15.04■□□□□ -0
SCN3B-202ENST00000392770 DOC2BQ14184 412 aa15.04■□□□□ -0
SCN3B-202ENST00000392770 MENTQ9BUN1 341 aa15.04■□□□□ -0
SCN3B-202ENST00000392770 LILRB5O75023 590 aa15.04■□□□□ -0
SCN3B-202ENST00000392770 DLX5P56178 289 aa15.04■□□□□ -0
SCN3B-202ENST00000392770 ZNF679Q8IYX0 411 aa15.04■□□□□ -0
SCN3B-202ENST00000392770 CARFQ8N187 725 aa15.04■□□□□ -0
SCN3B-202ENST00000392770 SMIM19Q96E16 107 aa15.04■□□□□ -0
SCN3B-202ENST00000392770 C20orf85Q9H1P6 137 aa15.04■□□□□ -0
SCN3B-202ENST00000392770 ING1Q9UK53 422 aaPredicted RBP15.04■□□□□ -0
SCN3B-202ENST00000392770 TIMM10BQ9Y5J6 103 aa15.04■□□□□ -0
SCN3B-202ENST00000392770 TK1P04183 234 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 PTBP1P26599 531 aaKnown RBP eCLIP15.03■□□□□ -0
SCN3B-202ENST00000392770 PTGS2P35354 604 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 DSCR4P56555 118 aaPredicted RBP15.03■□□□□ -0
SCN3B-202ENST00000392770 OR10A3P58181 314 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 SPEM2Q0P670 501 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 RBM39Q14498 530 aaKnown RBP15.03■□□□□ -0
SCN3B-202ENST00000392770 STEAP1BQ6NZ63 245 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 GTPBP8Q8N3Z3 284 aaPredicted RBP15.03■□□□□ -0
SCN3B-202ENST00000392770 OR1M1Q8NGA1 313 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 LIPHQ8WWY8 451 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 TRIB1Q96RU8 372 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 TRAPPC2LQ9UL33 140 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 CBR3O75828 277 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 TCRBP04435 133 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 MOB1AQ9H8S9 216 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 TMEM265A0A087WTH1 108 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 HOXB5P09067 269 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 RPL19P84098 196 aaKnown RBP15.03■□□□□ -0
SCN3B-202ENST00000392770 CDK5R1Q15078 307 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 OR4C3Q8NH37 302 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 ANKRD9Q96BM1 317 aaPredicted RBP15.03■□□□□ -0
SCN3B-202ENST00000392770 SLCO1C1Q9NYB5 712 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 CD300LBA8K4G0 201 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 IMPA2O14732 288 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 OR8U9P0C7N5 309 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 TGM4P49221 684 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 PCBP3P57721 371 aaKnown RBP15.03■□□□□ -0
SCN3B-202ENST00000392770 SYT9Q86SS6 491 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 R4GMQ9 66 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 SULT1C4O75897 302 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 CPT2P23786 658 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 LCN10Q6JVE6 187 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 FCRL1Q96LA6 429 aa15.03■□□□□ -0
SCN3B-202ENST00000392770 SULT1B1O43704 296 aa15.02■□□□□ -0
SCN3B-202ENST00000392770 IFNA2P01563 188 aa15.02■□□□□ -0
SCN3B-202ENST00000392770 POU3F3P20264 500 aaPredicted RBP15.02■□□□□ -0
SCN3B-202ENST00000392770 IL20Q9NYY1 176 aa15.02■□□□□ -0
SCN3B-202ENST00000392770 B9D1Q9UPM9 204 aa15.02■□□□□ -0
SCN3B-202ENST00000392770 R4GN57 208 aa15.02■□□□□ -0
SCN3B-202ENST00000392770 TRABD2BA6NFA1 517 aa15.02■□□□□ -0
SCN3B-202ENST00000392770 ANKRD61A6NGH8 418 aa15.02■□□□□ -0
SCN3B-202ENST00000392770 SSTR2P30874 369 aa15.02■□□□□ -0
SCN3B-202ENST00000392770 SLC17A1Q14916 467 aa15.02■□□□□ -0
SCN3B-202ENST00000392770 TMPRSS11FQ6ZWK6 438 aa15.02■□□□□ -0
SCN3B-202ENST00000392770 METTL17Q9H7H0 456 aaPredicted RBP15.02■□□□□ -0
SCN3B-202ENST00000392770 RAF1P04049 648 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 UBBP0CG47 229 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 FCARP24071 287 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 FAM71CQ8NEG0 241 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 NOXO1Q8NFA2 376 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 OR10G3Q8NGC4 313 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 ROBO4Q8WZ75 1007 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 SULT4A1Q9BR01 284 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 BANF2Q9H503 90 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 ASF1BQ9NVP2 202 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 SIGLEC7Q9Y286 467 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 A0A1W2PS29 197 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 IL2RGP31785 369 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 TAS2R20P59543 309 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 MRM1Q6IN84 353 aaKnown RBP15.02□□□□□ -0.01
SCN3B-202ENST00000392770 PWWP2BQ6NUJ5 590 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 TCEAL3Q969E4 200 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 PCOLCE2Q9UKZ9 415 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 HDGFL3Q9Y3E1 203 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 MYO10Q9HD67 2058 aa15.02□□□□□ -0.01
SCN3B-202ENST00000392770 IGHV4-34P06331 123 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 CD53P19397 219 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 SORDQ00796 357 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 BHLHE23Q8NDY6 225 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 TNFSF14O43557 240 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 UBE2IP63279 158 aaKnown RBP15.01□□□□□ -0.01
SCN3B-202ENST00000392770 IL10RAQ13651 578 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 OR52N5Q8NH56 324 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 TMEM43Q9BTV4 400 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 MFRPQ9BY79 579 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 NGBQ9NPG2 151 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 AQP6Q13520 282 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 CCDC28AQ8IWP9 274 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 C3orf49Q96BT1 292 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 ZNF764Q96H86 408 aaPredicted RBP15.01□□□□□ -0.01
SCN3B-202ENST00000392770 OCSTAMPQ9BR26 566 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 PBOV1Q9GZY1 135 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 RGCCQ9H4X1 137 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms