RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 MBTPS1Q14703 1052 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 DEFB133Q30KQ1 61 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 EMC4Q5J8M3 183 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 Q6ZSR6 202 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 ZNF573Q86YE8 665 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 WDTC1Q8N5D0 677 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 RHOXF1Q8NHV9 184 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 SMIM7Q9BQ49 75 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 USP36Q9P275 1121 aaKnown RBP13.59□□□□□ -0.23
CCDC50-201ENST00000392455 MMACHCQ9Y4U1 282 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 GDNFP39905 211 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 ERVFC1-1P60608 527 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 TSPAN31Q12999 210 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 FXNQ16595 210 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 C11orf40Q8WZ69 217 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 H1FXQ92522 213 aaKnown RBP13.59□□□□□ -0.23
CCDC50-201ENST00000392455 SEC11CQ9BY50 192 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 NOX4Q9NPH5 578 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 CNIH4Q9P003 139 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 VDAC3Q9Y277 283 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 B3GALT5Q9Y2C3 310 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 MED16Q9Y2X0 877 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 POU2F2P09086 479 aa13.58□□□□□ -0.23
CCDC50-201ENST00000392455 ARR3P36575 388 aa13.58□□□□□ -0.23
CCDC50-201ENST00000392455 ERVPABLB-1P60509 514 aa13.58□□□□□ -0.23
CCDC50-201ENST00000392455 ZNF551Q7Z340 670 aaPredicted RBP13.58□□□□□ -0.23
CCDC50-201ENST00000392455 STACQ99469 402 aa13.58□□□□□ -0.23
CCDC50-201ENST00000392455 PTRH2Q9Y3E5 179 aaKnown RBP13.58□□□□□ -0.23
CCDC50-201ENST00000392455 C5orf52A6NGY3 159 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 ARSDP51689 593 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 TMEM184AQ6ZMB5 413 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 C7orf43Q8WVR3 580 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 SLC39A7Q92504 469 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 TRIM77I1YAP6 450 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 COX7A2P2O60397 106 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 DGAT2L7PQ6IED9 249 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 PLXDC2Q6UX71 529 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 GPR150Q8NGU9 434 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 A0A0B4J203 849 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 DNPH1O43598 174 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 ZNF17P17021 662 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 GP2P55259 537 aaKnown RBP13.58□□□□□ -0.24
CCDC50-201ENST00000392455 CARFQ8N187 725 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 OR10C1Q96KK4 312 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 RHOFQ9HBH0 211 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 LAMP1P11279 417 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 PPP2CBP62714 309 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 OR1Q1Q15612 314 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 C6orf132Q5T0Z8 1188 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 LHFPL2Q6ZUX7 228 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 WDR83Q9BRX9 315 aaKnown RBP13.58□□□□□ -0.24
CCDC50-201ENST00000392455 BMPR1AP36894 532 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 PIN1Q13526 163 aaPredicted RBP13.58□□□□□ -0.24
CCDC50-201ENST00000392455 BEX5Q5H9J7 111 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 ZNF534Q76KX8 674 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 CBARPQ8N350 705 aaPredicted RBP13.58□□□□□ -0.24
CCDC50-201ENST00000392455 NPWQ8N729 165 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 OR8J2Q8NGG1 315 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 RHBDD1Q8TEB9 315 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 ST8SIA2Q92186 375 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 HRH3Q9Y5N1 445 aa13.58□□□□□ -0.24
CCDC50-201ENST00000392455 DOT1LQ8TEK3 1739 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 ZNF716A6NP11 495 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 ZP2Q05996 745 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 TOLLIPQ9H0E2 274 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 OR10AD1Q8NGE0 317 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 UBQLN3Q9H347 655 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 SH3BGRL2Q9UJC5 107 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 PI4KAP42356 2102 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 TRBV11-1A0A0K0K1C0 115 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 GM2AP17900 193 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 ITGB7P26010 798 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 CD81P60033 236 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 KRTDAPP60985 99 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 PAX5Q02548 391 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 SQSTM1Q13501 440 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 ERASQ7Z444 233 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 DOLPP1Q86YN1 238 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 FUBP1Q96AE4 644 aaKnown RBP13.57□□□□□ -0.24
CCDC50-201ENST00000392455 HSPB8Q9UJY1 196 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 FABP7O15540 132 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 CRYBA1P05813 215 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 SULT1A3P0DMM9 295 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 SULT1A4P0DMN0 295 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 P2RY2P41231 377 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 OR2AK2Q8NG84 335 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 OR9Q2Q8NGE9 314 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 PKMYT1Q99640 499 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 THYN1Q9P016 225 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 SCN11AQ9UI33 1791 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 SSTR2P30874 369 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 NXNL2Q5VZ03 156 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 SFXN4Q6P4A7 337 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 ANKRD16Q6P6B7 361 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 GDE1Q9NZC3 331 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 MEIS3P1A6NDR6 274 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 IL5P05113 134 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 HTR1FP30939 366 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 TMUB2Q71RG4 321 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 BCO1Q9HAY6 547 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms