RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 GPR35Q9HC97 309 aa23.66■■□□□ 1.38
MSX1-201ENST00000382723 SLC7A10Q9NS82 523 aa23.66■■□□□ 1.38
MSX1-201ENST00000382723 LHFPL6Q9Y693 200 aa23.66■■□□□ 1.38
MSX1-201ENST00000382723 GPX5O75715 221 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 MSR1P21757 451 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 AGTR1P30556 359 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 SIRPAP78324 504 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 ROR2Q01974 943 aaKnown RBP23.65■■□□□ 1.38
MSX1-201ENST00000382723 SLC3A1Q07837 685 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 SPCS2Q15005 226 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 KCNMB1Q16558 191 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 CEACAM16Q2WEN9 425 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 ACSF3Q4G176 576 aaPredicted RBP23.65■■□□□ 1.38
MSX1-201ENST00000382723 LIPNQ5VXI9 398 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 ZNF324BQ6AW86 544 aaPredicted RBP23.65■■□□□ 1.38
MSX1-201ENST00000382723 KCTD18Q6PI47 426 aaPredicted RBP23.65■■□□□ 1.38
MSX1-201ENST00000382723 KRT77Q7Z794 578 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 ZNF100Q8IYN0 542 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 ST7LQ8TDW4 575 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 DCUN1D5Q9BTE7 237 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 CENPOQ9BU64 300 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 RNF167Q9H6Y7 350 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 ELOVL3Q9HB03 270 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 ASH2LQ9UBL3 628 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 ST6GALNAC2Q9UJ37 374 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 STUB1Q9UNE7 303 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 PIEZO2Q9H5I5 2752 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 A0A1W2PPW3 197 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 AHRRA9YTQ3 701 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 SULT1C4O75897 302 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 ABHD16AO95870 558 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 PCSK6P29122 969 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 CRYBB2P43320 205 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 TIMM50Q3ZCQ8 353 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 RIPPLY2Q5TAB7 128 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 GCNT2Q8N0V5 402 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 LRRC18Q8N456 261 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 OR2AJ1Q8NGZ0 328 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 CPT1CQ8TCG5 803 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 NABP1Q96AH0 204 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 GMPPAQ96IJ6 420 aaPredicted RBP23.65■■□□□ 1.38
MSX1-201ENST00000382723 ZNF416Q9BWM5 594 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 MROQ9BYG7 248 aa23.65■■□□□ 1.38
MSX1-201ENST00000382723 SF3B6Q9Y3B4 125 aaKnown RBP23.65■■□□□ 1.38
MSX1-201ENST00000382723 TPOP07202 933 aa23.64■■□□□ 1.37
MSX1-201ENST00000382723 GABRA5P31644 462 aa23.64■■□□□ 1.37
MSX1-201ENST00000382723 FOXL2NBQ6ZUU3 175 aa23.64■■□□□ 1.37
MSX1-201ENST00000382723 ZNF679Q8IYX0 411 aa23.64■■□□□ 1.37
MSX1-201ENST00000382723 MAP6Q96JE9 813 aa23.64■■□□□ 1.37
MSX1-201ENST00000382723 BCL7BQ9BQE9 202 aa23.64■■□□□ 1.37
MSX1-201ENST00000382723 CENPMQ9NSP4 180 aa23.64■■□□□ 1.37
MSX1-201ENST00000382723 BSNQ9UPA5 3926 aa23.63■■□□□ 1.37
MSX1-201ENST00000382723 TMEM8BA6NDV4 472 aa23.63■■□□□ 1.37
MSX1-201ENST00000382723 UBE2J2Q8N2K1 259 aa23.63■■□□□ 1.37
MSX1-201ENST00000382723 NDNFQ8TB73 568 aa23.63■■□□□ 1.37
MSX1-201ENST00000382723 HSD17B8Q92506 261 aa23.63■■□□□ 1.37
MSX1-201ENST00000382723 TRMT61AQ96FX7 289 aaKnown RBP23.63■■□□□ 1.37
MSX1-201ENST00000382723 LINC00470Q9BZP3 86 aa23.63■■□□□ 1.37
MSX1-201ENST00000382723 PRORYQ9H606 182 aa23.63■■□□□ 1.37
MSX1-201ENST00000382723 GP6Q9HCN6 339 aa23.63■■□□□ 1.37
MSX1-201ENST00000382723 GDF2Q9UK05 429 aaPredicted RBP23.63■■□□□ 1.37
MSX1-201ENST00000382723 ROM1Q03395 351 aa23.63■■□□□ 1.37
MSX1-201ENST00000382723 GPR50Q13585 617 aa23.63■■□□□ 1.37
MSX1-201ENST00000382723 PRR30Q53SZ7 412 aaPredicted RBP23.63■■□□□ 1.37
MSX1-201ENST00000382723 OR7E24Q6IFN5 339 aa23.63■■□□□ 1.37
MSX1-201ENST00000382723 CFAP77Q6ZQR2 320 aa23.63■■□□□ 1.37
MSX1-201ENST00000382723 C9orf106Q8NAJ2 232 aa23.63■■□□□ 1.37
MSX1-201ENST00000382723 C1orf198Q9H425 327 aa23.63■■□□□ 1.37
MSX1-201ENST00000382723 UPB1Q9UBR1 384 aa23.63■■□□□ 1.37
MSX1-201ENST00000382723 ZZEF1O43149 2961 aa23.62■■□□□ 1.37
MSX1-201ENST00000382723 TRBV2A0A0J9YWF9 115 aa23.62■■□□□ 1.37
MSX1-201ENST00000382723 SLC22A1O15245 554 aa23.62■■□□□ 1.37
MSX1-201ENST00000382723 PLPP2O43688 288 aa23.62■■□□□ 1.37
MSX1-201ENST00000382723 SS18L1O75177 396 aaPredicted RBP23.62■■□□□ 1.37
MSX1-201ENST00000382723 LSM6P62312 80 aaKnown RBP23.62■■□□□ 1.37
MSX1-201ENST00000382723 MRPS34P82930 218 aaKnown RBP23.62■■□□□ 1.37
MSX1-201ENST00000382723 CDK5R1Q15078 307 aa23.62■■□□□ 1.37
MSX1-201ENST00000382723 DMKNQ6E0U4 476 aaPredicted RBP23.62■■□□□ 1.37
MSX1-201ENST00000382723 RPL22L1Q6P5R6 122 aaKnown RBP23.62■■□□□ 1.37
MSX1-201ENST00000382723 WNT2BQ93097 391 aa23.62■■□□□ 1.37
MSX1-201ENST00000382723 RNF166Q96A37 237 aaPredicted RBP23.62■■□□□ 1.37
MSX1-201ENST00000382723 SNRNP40Q96DI7 357 aaKnown RBP23.62■■□□□ 1.37
MSX1-201ENST00000382723 SLAMF6Q96DU3 332 aa23.62■■□□□ 1.37
MSX1-201ENST00000382723 TMEM38BQ9NVV0 291 aa23.62■■□□□ 1.37
MSX1-201ENST00000382723 SSR3Q9UNL2 185 aa23.62■■□□□ 1.37
MSX1-201ENST00000382723 LRP12Q9Y561 859 aa23.62■■□□□ 1.37
MSX1-201ENST00000382723 OGG1O15527 345 aa23.61■■□□□ 1.37
MSX1-201ENST00000382723 B4GALT1P15291 398 aa23.61■■□□□ 1.37
MSX1-201ENST00000382723 NANOS3P60323 173 aaKnown RBP23.61■■□□□ 1.37
MSX1-201ENST00000382723 FABP5Q01469 135 aa23.61■■□□□ 1.37
MSX1-201ENST00000382723 NFATC3Q12968 1075 aa23.61■■□□□ 1.37
MSX1-201ENST00000382723 ENDOGQ14249 297 aaKnown RBP23.61■■□□□ 1.37
MSX1-201ENST00000382723 CCDC58Q4VC31 144 aa23.61■■□□□ 1.37
MSX1-201ENST00000382723 C9orf135Q5VTT2 229 aa23.61■■□□□ 1.37
MSX1-201ENST00000382723 FOXB1Q99853 325 aa23.61■■□□□ 1.37
MSX1-201ENST00000382723 HDHD5Q9BXW7 423 aa23.61■■□□□ 1.37
MSX1-201ENST00000382723 GLRX2Q9NS18 164 aa23.61■■□□□ 1.37
MSX1-201ENST00000382723 OR6C65A6NJZ3 312 aa23.61■■□□□ 1.37
MSX1-201ENST00000382723 RER1O15258 196 aa23.61■■□□□ 1.37
MSX1-201ENST00000382723 GDI2P50395 445 aaKnown RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms