RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 CRB3Q9BUF7 120 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 DDX31Q9H8H2 851 aaKnown RBP4.49□□□□□ -1.69
PTPRD-203ENST00000381196 TMEM242Q9NWH2 141 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 MYLKQ15746 1914 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 BRCA1P38398 1863 aaKnown RBP4.49□□□□□ -1.69
PTPRD-203ENST00000381196 DBHP09172 617 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 RPL35P42766 123 aaKnown RBP4.49□□□□□ -1.69
PTPRD-203ENST00000381196 RAB38P57729 211 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 SH3BP2P78314 561 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 FOXK2Q01167 660 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 HHEXQ03014 270 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 FOXC1Q12948 553 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 MALLQ13021 153 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 FAM69BQ5VUD6 431 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 COX15Q7KZN9 410 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 ZADH2Q8N4Q0 377 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 BEND2Q8NDZ0 799 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 OR51A4Q8NGJ6 313 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 OR6K6Q8NGW6 343 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 OR5B3Q8NH48 314 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 FLVCR2Q9UPI3 526 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 TP53TG5Q9Y2B4 290 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 ANKHD1Q8IWZ3 2542 aaKnown RBP4.49□□□□□ -1.69
PTPRD-203ENST00000381196 ITGB8P26012 769 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 ELAVL4P26378 380 aaKnown RBP4.49□□□□□ -1.69
PTPRD-203ENST00000381196 G0S2P27469 103 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 TEAD1P28347 426 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 CD80P33681 288 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 CNR2P34972 360 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 STARD6P59095 220 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 CATSPEREQ5SY80 951 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 WBP2NLQ6ICG8 309 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 PAQR3Q6TCH7 311 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.49□□□□□ -1.69
PTPRD-203ENST00000381196 MAVSQ7Z434 540 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 LINC00596Q86U02 117 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 SIAH3Q8IW03 269 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 C14orf79Q96F83 325 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 BOD1Q96IK1 185 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 RNF2Q99496 336 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 ATG101Q9BSB4 218 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 GSKIPQ9P0R6 139 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 SLC7A7Q9UM01 511 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 IGKV6D-21A0A0A0MT36 114 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 FZD6O60353 706 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 CSO75390 466 aaKnown RBP4.49□□□□□ -1.69
PTPRD-203ENST00000381196 CD99P14209 185 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 PRF1P14222 555 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 TNFSF4P23510 183 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 CD38P28907 300 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 PYCR1P32322 319 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 ARSDP51689 593 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 OR12D2P58182 307 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 NTHL1P78549 312 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 GAGE1Q13065 139 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 KCNMB1Q16558 191 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 DEFB133Q30KQ1 61 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 TNFAIP8L2Q6P589 184 aaPredicted RBP4.49□□□□□ -1.69
PTPRD-203ENST00000381196 AGTRAPQ6RW13 159 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 LANCL3Q6ZV70 420 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 LGI3Q8N145 548 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 LRRC18Q8N456 261 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 THAP3Q8WTV1 239 aaPredicted RBP4.49□□□□□ -1.69
PTPRD-203ENST00000381196 RTL8AQ9BWD3 113 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 PHF7Q9BWX1 381 aaPredicted RBP4.49□□□□□ -1.69
PTPRD-203ENST00000381196 SAMD10Q9BYL1 202 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 CENPMQ9NSP4 180 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 CTSFQ9UBX1 484 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 CPSF4LA6NMK7 179 aaKnown RBP4.49□□□□□ -1.69
PTPRD-203ENST00000381196 PIRO00625 290 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 SPDEFO95238 335 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 DUS4LO95620 317 aaKnown RBP4.49□□□□□ -1.69
PTPRD-203ENST00000381196 FGF2P09038 288 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 MTHFD2P13995 350 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 HMGA1P17096 107 aaKnown RBP4.49□□□□□ -1.69
PTPRD-203ENST00000381196 AKR1C4P17516 323 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 BMP5P22003 454 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 GRB2P62993 217 aaKnown RBP4.49□□□□□ -1.69
PTPRD-203ENST00000381196 DCAF12Q5T6F0 453 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 TGIF2LYQ8IUE0 185 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 SLC39A11Q8N1S5 342 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 GPR137CQ8N3F9 429 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 FGF13Q92913 245 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 TAF9BQ9HBM6 251 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 APOBEC3GQ9HC16 384 aaKnown RBP4.49□□□□□ -1.69
PTPRD-203ENST00000381196 UTS2RQ9UKP6 389 aa4.49□□□□□ -1.69
PTPRD-203ENST00000381196 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 M0R082 166 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 SIRPB1O00241 398 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 HAND1O96004 215 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 SEC11BP0C7V7 166 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 LAMP1P11279 417 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF28P17035 718 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 ERVPABLB-1P60509 514 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TNFRSF17Q02223 184 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 IL13RA2Q14627 380 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TMEM128Q5BJH2 165 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 DLEU7Q6UYE1 221 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 KLHDC8AQ8IYD2 350 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TMEFF1Q8IYR6 380 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms