RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 OR1E2P47887 323 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 CTXN1P60606 82 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 PPP1CBP62140 327 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 ERVK-25P63136 954 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 PSG4Q00888 419 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 GLO1Q04760 184 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 KLF10Q13118 480 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 TRAM2Q15035 370 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 AVPI1Q5T686 147 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 SLC25A47Q6Q0C1 308 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 RRM2BQ7LG56 351 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 OAFQ86UD1 273 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 OFCC1Q8IZS5 231 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 BPIFB2Q8N4F0 458 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 SPICQ8N5J4 248 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-204ENST00000376643 FAM156AQ8NDB6 213 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 MOSPD2Q8NHP6 518 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 SLC25A40Q8TBP6 338 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 IPCEF1Q8WWN9 437 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-204ENST00000376643 GEMIN6Q8WXD5 167 aaKnown RBP12.55□□□□□ -0.4
HDAC6-204ENST00000376643 CCL17Q92583 94 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 ZNF583Q96ND8 569 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 NTN4Q9HB63 628 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 CAPN7Q9Y6W3 813 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 PPIAL4EA0A075B759 164 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 PPIAL4CA0A0B4J2A2 164 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 A0A1W2PPL8 197 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 ISPDA4D126 451 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 EFCAB9A8MZ26 197 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 PPIAL4DF5H284 164 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 J3QW42 95 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 WNT9BO14905 357 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 TIMM8AO60220 97 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-204ENST00000376643 VENTXO95231 258 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 ABHD16AO95870 558 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 IGHV1-46P01743 117 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 PPIAL4FP0DN26 164 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 TNFRSF1BP20333 461 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 COMPP49747 757 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-204ENST00000376643 MMP15P51511 669 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 FMODQ06828 376 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 LAPTM4AQ15012 233 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 MTX3Q5HYI7 312 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 FOXL2NBQ6ZUU3 175 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 CYP4Z1Q86W10 505 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 MICU2Q8IYU8 434 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 ZNF101Q8IZC7 436 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 AKR7LQ8NHP1 331 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 GCDHQ92947 438 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-204ENST00000376643 C4orf45Q96LM5 186 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 OR2J1Q9GZK6 312 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 ANKRD19PQ9H560 264 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 KRCC1Q9NPI7 259 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-204ENST00000376643 MAN2C1Q9NTJ4 1040 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 TBCCD1Q9NVR7 557 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 GRHPRQ9UBQ7 328 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 TMEM5Q9Y2B1 443 aa12.54□□□□□ -0.4
HDAC6-204ENST00000376643 LOC100509620A0A075B734 347 aa12.53□□□□□ -0.4
HDAC6-204ENST00000376643 IFNL4K9M1U5 179 aa12.53□□□□□ -0.4
HDAC6-204ENST00000376643 SHOX2O60902 331 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-204ENST00000376643 DEAF1O75398 565 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-204ENST00000376643 CPT2P23786 658 aa12.53□□□□□ -0.4
HDAC6-204ENST00000376643 LAP3P28838 519 aa12.53□□□□□ -0.4
HDAC6-204ENST00000376643 RPL4P36578 427 aaKnown RBP12.53□□□□□ -0.4
HDAC6-204ENST00000376643 WNT5AP41221 380 aa12.53□□□□□ -0.4
HDAC6-204ENST00000376643 SPATA46Q5T0L3 261 aa12.53□□□□□ -0.4
HDAC6-204ENST00000376643 RBMS3Q6XE24 437 aaKnown RBP12.53□□□□□ -0.4
HDAC6-204ENST00000376643 ZNF730Q6ZMV8 503 aa12.53□□□□□ -0.4
HDAC6-204ENST00000376643 KLHL36Q8N4N3 616 aa12.53□□□□□ -0.4
HDAC6-204ENST00000376643 C3orf56Q8N813 242 aa12.53□□□□□ -0.4
HDAC6-204ENST00000376643 ACOT11Q8WXI4 607 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-204ENST00000376643 SAR1AQ9NR31 198 aa12.53□□□□□ -0.4
HDAC6-204ENST00000376643 A4GNTQ9UNA3 340 aa12.53□□□□□ -0.4
HDAC6-204ENST00000376643 LOC105371242A0A075B767 164 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 GSTA4O15217 222 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 UBOX5O94941 541 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 MAKP20794 623 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 CFPP27918 469 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 TNFAIP6P98066 277 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-204ENST00000376643 PRKCDQ05655 676 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 IFI44LQ53G44 452 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 THSD4Q6ZMP0 1018 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 RFPL4BQ6ZWI9 263 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 NRMQ8IXM6 262 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 SGMS2Q8NHU3 365 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 RP9Q8TA86 221 aaKnown RBP12.52□□□□□ -0.41
HDAC6-204ENST00000376643 TMPRSS13Q9BYE2 586 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 WNT5BQ9H1J7 359 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 C7orf69Q9H7B7 122 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 ZMAT3Q9HA38 289 aaKnown RBP12.52□□□□□ -0.41
HDAC6-204ENST00000376643 POLE4Q9NR33 117 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 ATPIF1Q9UII2 106 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 NPTNQ9Y639 398 aa12.52□□□□□ -0.41
HDAC6-204ENST00000376643 NBEAL1Q6ZS30 2694 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 LOC100653049A0A140TA62 436 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 TMEM89A2RUT3 159 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 SGCEO43556 437 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 DOK2O60496 412 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 KRT34O76011 436 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms