RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 OR14K1Q8NGZ2 314 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 OR6C1Q96RD1 312 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 CYSLTR2Q9NS75 346 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 MYOFQ9NZM1 2061 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 EFCAB7A8K855 629 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 BET1O15155 118 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 SULT1B1O43704 296 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 GMDSO60547 372 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 AKR1C3P42330 323 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 UBE2IP63279 158 aaKnown RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 MPEG1Q2M385 716 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 FIP1L1Q6UN15 594 aaKnown RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 UBE3DQ7Z6J8 389 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 OR4D9Q8NGE8 314 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 BAHD1Q8TBE0 780 aaPredicted RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 C14orf79Q96F83 325 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 NXF2Q9GZY0 626 aaKnown RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 ANKRD10Q9NXR5 420 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 ARPC4-TTLL3A0A0A6YYG9 625 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 IGHV3-15A0A0B4J1V0 119 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 BLVRBP30043 206 aaPredicted RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 NKX6-1P78426 367 aaPredicted RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 OR52W1Q6IF63 320 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 SLC22A24Q8N4F4 322 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 TMEM217Q8N7C4 229 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF709Q8N972 641 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 CCDC71LQ8N9Z2 235 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 TOX2Q96NM4 488 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 C1orf123Q9NWV4 160 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 TRAV1-2A0A0B4J238 106 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 OR5H14A6NHG9 310 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 ST6GAL1P15907 406 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 FAM213BQ8TBF2 198 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 RSPRY1Q96DX4 576 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 DNTTIP1Q9H147 329 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 EVA1AQ9H8M9 152 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 RAB22AQ9UL26 194 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 RD3LP0DJH9 198 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 IL32P24001 234 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 C21orf58P58505 322 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF85Q03923 595 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 NT5CQ8TCD5 201 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 ST7LQ8TDW4 575 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 FBLIM1Q8WUP2 373 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 DCBLD2Q96PD2 775 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 DHRS9Q9BPW9 319 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 CNTNAP3Q9BZ76 1288 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 TAF9BQ9HBM6 251 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 DUSP22Q9NRW4 184 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF749O43361 778 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 CXCL10P02778 98 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 P04436 131 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 CD1CP29017 333 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 ACKR1Q16570 336 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 ANKRD33Q7Z3H0 272 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 SMIM4Q8WVI0 70 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 CMBLQ96DG6 245 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 WDR89Q96FK6 387 aaPredicted RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 TINAGL1Q9GZM7 467 aaPredicted RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 A0A0B4J2E0 115 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 A0A1B0GX12 115 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 OR5K3A6NET4 321 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 FCRL6Q6DN72 434 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 NPSR1Q6W5P4 371 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 ANGPTL5Q86XS5 388 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 TCTEX1D2Q8WW35 142 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 PAPOLGQ9BWT3 736 aaKnown RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 PRR13Q9NZ81 148 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 SDCBPO00560 298 aaPredicted RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 CELA2BP08218 269 aaPredicted RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 CSNK1EP49674 416 aaKnown RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 LPAL2Q16609 132 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF362Q5T0B9 420 aaPredicted RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 KIAA0907Q7Z7F0 614 aaPredicted RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 SLC38A6Q8IZM9 456 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 HAVCR2Q8TDQ0 301 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 GPR173Q9NS66 373 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 DNAJB12Q9NXW2 375 aaKnown RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 LSM2Q9Y333 95 aaKnown RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 NPFFR2Q9Y5X5 522 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 CT62P0C5K7 136 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 CDAP32320 146 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 MTCP1P56278 107 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 RPS18P62269 152 aaKnown RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 FAM219AQ8IW50 185 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 OR56B1Q8NGI3 324 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 ANGPTL6Q8NI99 470 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 TCEAL3Q969E4 200 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 TAAR8Q969N4 342 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 SDSLQ96GA7 329 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 FLRT3Q9NZU0 649 aa5.95□□□□□ -1.46
SMC1A-202ENST00000375340 PTRH2Q9Y3E5 179 aaKnown RBP5.95□□□□□ -1.46
SMC1A-202ENST00000375340 PLA2G10O15496 165 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 POU3F2P20265 443 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 S100PP25815 95 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 ALDH3B1P43353 468 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 SIGIRRQ6IA17 410 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 IL17RCQ8NAC3 791 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 OR1M1Q8NGA1 313 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms