RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 B3GLCTQ6Y288 498 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 NRMQ8IXM6 262 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 ENTHD1Q8IYW4 607 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 GALNT16Q8N428 558 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 OR1S1Q8NH92 325 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 IMP4Q96G21 291 aaKnown RBP7.94□□□□□ -1.14
SYNE1-206ENST00000367253 DCLRE1CQ96SD1 692 aaKnown RBP7.94□□□□□ -1.14
SYNE1-206ENST00000367253 FAM173AQ9BQD7 235 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 THAP7Q9BT49 309 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-206ENST00000367253 NMNAT2Q9BZQ4 307 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 C6orf106Q9H6K1 298 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-206ENST00000367253 SLCO1C1Q9NYB5 712 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 RNF150Q9ULK6 438 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 COQ4Q9Y3A0 265 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 A0A1B0GUL6 1792 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 NDUFS6O75380 124 aaKnown RBP7.94□□□□□ -1.14
SYNE1-206ENST00000367253 RECKO95980 971 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 LALBAP00709 142 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 AKAIN1P0CW23 69 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF44P15621 663 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 AGFG1P52594 562 aaKnown RBP7.94□□□□□ -1.14
SYNE1-206ENST00000367253 PCK2Q16822 640 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 CMTM1Q8IZ96 169 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 SIRT6Q8N6T7 355 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 OR4A4PQ8NGN8 299 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 OR56B4Q8NH76 319 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 SLCO2A1Q92959 643 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 GRAMD2BQ96HH9 432 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 KCNK17Q96T54 332 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 NXF2Q9GZY0 626 aaKnown RBP7.94□□□□□ -1.14
SYNE1-206ENST00000367253 NIPAL2Q9H841 368 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 ASCL3Q9NQ33 180 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 RXFP3Q9NSD7 469 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 NPAP1Q9NZP6 1156 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 CACNG4Q9UBN1 327 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 B3GALT1Q9Y5Z6 326 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 DNAJC25-GNG10A0A024R161 153 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 FAM159BA6NKW6 160 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 GPR137BO60478 399 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 OR8U8P0C7N1 319 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF728P0DKX0 622 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 ARNTP27540 789 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 LRRC10Q5BKY1 277 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 OR10K2Q6IF99 312 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 CPNE8Q86YQ8 564 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 RDH10Q8IZV5 341 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 OR8U1Q8NH10 309 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 SCMH1Q96GD3 660 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 DIRC2Q96SL1 478 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 PRRT1Q99946 306 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 NIPSNAP3BQ9BS92 247 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF2Q9BSG1 426 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-206ENST00000367253 KLF16Q9BXK1 252 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-206ENST00000367253 ANKRD60Q9BZ19 345 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 SHARPINQ9H0F6 387 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 YAE1D1Q9NRH1 226 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 GALPQ9UBC7 116 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 FBXL4Q9UKA2 621 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 TUBGCP6Q96RT7 1819 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 NUDT3O95989 172 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 SP9P0CG40 484 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 GLRA1P23415 457 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 DDTP30046 118 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 HCCSP53701 268 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 CATR1Q13166 79 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 HIKESHIQ53FT3 197 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 OR13C9Q8NGT0 318 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 MAL2Q969L2 176 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 TOMM40LQ969M1 308 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 SLC35B4Q969S0 331 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 L3HYPDHQ96EM0 354 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 NOL4LQ96MY1 436 aaPredicted RBP7.93□□□□□ -1.14
SYNE1-206ENST00000367253 S1PR5Q9H228 398 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 CHST8Q9H2A9 424 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 RGPD3A6NKT7 1758 aaPredicted RBP7.93□□□□□ -1.14
SYNE1-206ENST00000367253 RGPD4Q7Z3J3 1758 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 ANKRD31Q8N7Z5 1873 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 A0A1B0GTQ1 180 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF736B4DX44 427 aaPredicted RBP7.93□□□□□ -1.14
SYNE1-206ENST00000367253 NCR1O76036 304 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 TMEM225BP0DP42 221 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 ARR3P36575 388 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 OR1D4P47884 311 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 IL13RA1P78552 427 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 MICAQ29983 383 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 SIRPB2Q5JXA9 342 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 ZFP41Q8N8Y5 198 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 OR4K15Q8NH41 348 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 PIGTQ969N2 578 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 SDSLQ96GA7 329 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 CFHR5Q9BXR6 569 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 GAL3ST2Q9H3Q3 398 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 MYOZ1Q9NP98 299 aaPredicted RBP7.93□□□□□ -1.14
SYNE1-206ENST00000367253 FBXO24O75426 580 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 STATHP02808 62 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 MAS1P04201 325 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 RAB38P57729 211 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 MEF2DQ14814 521 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 NNATQ16517 81 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 TMEM176BQ3YBM2 270 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms