RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 CLPSL1A2RUU4 121 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 BLOC1S5-TXNDC5H3BN57 136 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 IFNL4K9M1U5 179 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 M0R3H8 397 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 KPNA4O00629 521 aaPredicted RBP11.62□□□□□ -0.55
VPS29-201ENST00000360579 SNNO75324 88 aaPredicted RBP11.62□□□□□ -0.55
VPS29-201ENST00000360579 TRMUO75648 421 aaKnown RBP11.62□□□□□ -0.55
VPS29-201ENST00000360579 NGFP01138 241 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 ACADSP16219 412 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 GSTM3P21266 225 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 AQP1P29972 269 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 PCBD1P61457 104 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 PSG4Q00888 419 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 TAF11Q15544 211 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 SGCAQ16586 387 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 SPRNQ5BIV9 151 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 ENTPD8Q5MY95 495 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 FAM27BQ5VT28 67 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 TMEM86BQ8N661 226 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 NPEPL1Q8NDH3 523 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 AKR7LQ8NHP1 331 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 VANGL1Q8TAA9 524 aaPredicted RBP11.62□□□□□ -0.55
VPS29-201ENST00000360579 RAB40AQ8WXH6 277 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 ASB10Q8WXI3 467 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 NABP1Q96AH0 204 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 C4orf45Q96LM5 186 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 MAGEB18Q96M61 343 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 SLC30A2Q9BRI3 323 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 NOX4Q9NPH5 578 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 IL19Q9UHD0 177 aa11.62□□□□□ -0.55
VPS29-201ENST00000360579 TANC2Q9HCD6 1990 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 IGHV2-70DA0A0C4DH43 119 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 TRAPPC13A5PLN9 417 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 CPSF4LA6NMK7 179 aaKnown RBP11.61□□□□□ -0.55
VPS29-201ENST00000360579 CEACAM18A8MTB9 384 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 EVPLLA8MZ36 301 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 WNT2P09544 360 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 CDAP32320 146 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 GUCA1AP43080 201 aaPredicted RBP11.61□□□□□ -0.55
VPS29-201ENST00000360579 UGT2B15P54855 530 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 STX1BP61266 288 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 RPL15P61313 204 aaKnown RBP11.61□□□□□ -0.55
VPS29-201ENST00000360579 VSNL1P62760 191 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 ERVK-25P63136 954 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 PAX2Q02962 417 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 RPL18Q07020 188 aaKnown RBP11.61□□□□□ -0.55
VPS29-201ENST00000360579 SRSF4Q08170 494 aaKnown RBP11.61□□□□□ -0.55
VPS29-201ENST00000360579 PSG7Q13046 419 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 MPP2Q14168 576 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 FIP1L1Q6UN15 594 aaKnown RBP11.61□□□□□ -0.55
VPS29-201ENST00000360579 JAZF1Q86VZ6 243 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 MSRB3Q8IXL7 192 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 C10orf111Q8N326 155 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 SMYD1Q8NB12 490 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 OR2Z1Q8NG97 314 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 OR6T1Q8NGN1 323 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 OR10S1Q8NGN2 331 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 ADAMTS16Q8TE57 1224 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 AENQ8WTP8 325 aaKnown RBP11.61□□□□□ -0.55
VPS29-201ENST00000360579 PLEKHA8Q96JA3 519 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 SIGLEC11Q96RL6 698 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 ZNF426Q9BUY5 554 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 OR2H1Q9GZK4 316 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 INIPQ9NRY2 104 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.61□□□□□ -0.55
VPS29-201ENST00000360579 MIOXQ9UGB7 285 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 NDRG4Q9ULP0 352 aaKnown RBP11.61□□□□□ -0.55
VPS29-201ENST00000360579 SLC7A7Q9UM01 511 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 UGT2A1Q9Y4X1 527 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 TIMM10BQ9Y5J6 103 aa11.61□□□□□ -0.55
VPS29-201ENST00000360579 MDFIC2A0A1B0GVS7 189 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 NPIPB13A6NJU9 1138 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 NPIPB4C9JG80 1138 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 TMEM178BH3BS89 294 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 SLC2A10O95528 541 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 F13BP05160 661 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 CST2P09228 141 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 RPS2P15880 293 aaKnown RBP11.6□□□□□ -0.55
VPS29-201ENST00000360579 GPX2P18283 190 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 GNB2P62879 340 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 NPTX1Q15818 432 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 DEFB112Q30KQ8 113 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 GPR157Q5UAW9 335 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 RHOUQ7L0Q8 258 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 FNDC8Q8TC99 324 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 OR52B2Q96RD2 323 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 RBM4BQ9BQ04 359 aaKnown RBP11.6□□□□□ -0.55
VPS29-201ENST00000360579 WNT5BQ9H1J7 359 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 C1RLQ9NZP8 487 aa11.6□□□□□ -0.55
VPS29-201ENST00000360579 SOX21Q9Y651 276 aaPredicted RBP11.6□□□□□ -0.55
VPS29-201ENST00000360579 KIR2DS1A0A191URI9 304 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 ERLIN1O75477 346 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 LYPD3O95274 346 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 ABHD16AO95870 558 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 THY1P04216 161 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 KITLGP21583 273 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 MRPL19P49406 292 aaKnown RBP11.59□□□□□ -0.55
VPS29-201ENST00000360579 PCBP3P57721 371 aaKnown RBP11.59□□□□□ -0.55
VPS29-201ENST00000360579 CD47Q08722 323 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 HLXQ14774 488 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms