RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 A0A1W2PQY0 241 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 SAP18O00422 153 aaKnown RBP14.25□□□□□ -0.13
RTN3-205ENST00000356000 EIF1AYO14602 144 aaKnown RBP14.25□□□□□ -0.13
RTN3-205ENST00000356000 CTAG2O75638 210 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 TSPAN15O95858 294 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 CDKN1BP46527 198 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 RABIFP47224 123 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 EIF1AXP47813 144 aaKnown RBP14.25□□□□□ -0.13
RTN3-205ENST00000356000 OR3A1P47881 315 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 MANFP55145 182 aaKnown RBP14.25□□□□□ -0.13
RTN3-205ENST00000356000 PPP1R1AQ13522 171 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 AMZ1Q400G9 498 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 MED27Q6P2C8 311 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 STAC2Q6ZMT1 411 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 TPGS1Q6ZTW0 290 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 MBOAT2Q6ZWT7 520 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 MRPL52Q86TS9 123 aaKnown RBP14.25□□□□□ -0.13
RTN3-205ENST00000356000 KATNBL1Q9H079 304 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 BCL2L10Q9HD36 194 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 KCNJ16Q9NPI9 418 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 CMC2Q9NRP2 79 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 SIRT3Q9NTG7 399 aaPredicted RBP14.25□□□□□ -0.13
RTN3-205ENST00000356000 CBLN4Q9NTU7 201 aa14.25□□□□□ -0.13
RTN3-205ENST00000356000 MRPS33Q9Y291 106 aaKnown RBP14.25□□□□□ -0.13
RTN3-205ENST00000356000 YBX2Q9Y2T7 364 aaKnown RBP14.25□□□□□ -0.13
RTN3-205ENST00000356000 PRG3Q9Y2Y8 225 aaPredicted RBP14.25□□□□□ -0.13
RTN3-205ENST00000356000 MYO16Q9Y6X6 1858 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 KDELR3O43731 214 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 CBR3O75828 277 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 TIMP1P01033 207 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 CSRP1P21291 193 aaKnown RBP14.24□□□□□ -0.13
RTN3-205ENST00000356000 FXYD6P3P58550 94 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 ACTA2P62736 377 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 ACTG2P63267 376 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 ARHGAP11AQ6P4F7 1023 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 MOAP1Q96BY2 351 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 SLC35B3Q9H1N7 401 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 LNP1A1A4G5 178 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 M0QYG6 137 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 CA11O75493 328 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 ABLIM3O94929 683 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 DIRAS3O95661 229 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 TBX6O95947 436 aaPredicted RBP14.24□□□□□ -0.13
RTN3-205ENST00000356000 GCGP01275 180 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 KLK1P06870 262 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 NPY4RP50391 375 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 ETFRF1Q6IPR1 90 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 ZNF774Q6NX45 483 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 FBXO22Q8NEZ5 403 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 RNASE8Q8TDE3 154 aaKnown RBP14.24□□□□□ -0.13
RTN3-205ENST00000356000 FRZBQ92765 325 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 NEUROD4Q9HD90 331 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 VSIG4Q9Y279 399 aa14.24□□□□□ -0.13
RTN3-205ENST00000356000 TRAV18A0A075B6X5 111 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 C5orf51A6NDU8 294 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 P2RX6O15547 441 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 LIPCP11150 499 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 ADRA2CP18825 462 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 CYCSP99999 105 aaKnown RBP14.23□□□□□ -0.13
RTN3-205ENST00000356000 EGR3Q06889 387 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 RPL7L1Q6DKI1 246 aaKnown RBP14.23□□□□□ -0.13
RTN3-205ENST00000356000 OR52L1Q8NGH7 329 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 OR4K15Q8NH41 348 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 KLK6Q92876 244 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 BADQ92934 168 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 SHDQ96IW2 340 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 THOC3Q96J01 351 aaKnown RBP14.23□□□□□ -0.13
RTN3-205ENST00000356000 GNRHR2Q96P88 292 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 ARHGDIGQ99819 225 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 PIN4Q9Y237 131 aaKnown RBP14.23□□□□□ -0.13
RTN3-205ENST00000356000 FARSAQ9Y285 508 aaKnown RBP14.23□□□□□ -0.13
RTN3-205ENST00000356000 A0A087WWC5 75 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 ZNF705GA8MUZ8 300 aaPredicted RBP14.23□□□□□ -0.13
RTN3-205ENST00000356000 OR1G1P47890 313 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 CX3CR1P49238 355 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 EFEMP1Q12805 493 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 RIPPLY2Q5TAB7 128 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 TMEM268Q5VZI3 342 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 ARMC6Q6NXE6 501 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 ZNF343Q6P1L6 599 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 FAM129CQ86XR2 697 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 OR14K1Q8NGZ2 314 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 MAFAQ8NHW3 353 aaPredicted RBP14.23□□□□□ -0.13
RTN3-205ENST00000356000 SFXN5Q8TD22 340 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 EIF5A2Q9GZV4 153 aaKnown RBP14.23□□□□□ -0.13
RTN3-205ENST00000356000 CST11Q9H112 138 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 PLEKHA2Q9HB19 425 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 PITPNC1Q9UKF7 332 aa14.23□□□□□ -0.13
RTN3-205ENST00000356000 TAAR5O14804 337 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 FRS3O43559 492 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 DFFBO76075 338 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 TGFB1P01137 390 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 ZNF286BP0CG31 522 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 IL13RA1P78552 427 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 RASGEF1BQ0VAM2 473 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 MRPL58Q14197 206 aaKnown RBP14.22□□□□□ -0.13
RTN3-205ENST00000356000 SHHQ15465 462 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 CFAP52Q8N1V2 620 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 ZCCHC10Q8TBK6 192 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 RPS4Y2Q8TD47 263 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms