RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 SLC36A1Q7Z2H8 476 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 WDFY1Q8IWB7 410 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 ZNF519Q8TB69 540 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 RADILQ96JH8 1075 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 MNTQ99583 582 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 MED29Q9NX70 200 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 SPEF1Q9Y4P9 236 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 A0A1W2PR77 199 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 A8MVM7 634 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 MCRIP1C9JLW8 97 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 PLPP3O14495 311 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 CD2P06729 351 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 NUDT1P36639 197 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 OR7A5Q15622 319 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 DCXRQ7Z4W1 244 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 OR13C3Q8NGS6 347 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 C8orf44Q96CB5 159 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 SLC7A5P2Q9GIP4 190 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 COL4A2P08572 1712 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 FRYLO94915 3013 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 OR2M5A3KFT3 312 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 H3BML4 177 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 IL5P05113 134 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 HTR2CP28335 458 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 DLX5P56178 289 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 FBXW4P57775 412 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 UBXN2BQ14CS0 331 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 SCGB2B2Q4G0G5 96 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 EMC6Q9BV81 110 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 EPHA6Q9UF33 1036 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 WDFY3Q8IZQ1 3526 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 SNRPGP15A8MWD9 76 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 GLO1Q04760 184 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 C17orf107Q6ZR85 190 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 OR1N1Q8NGS0 311 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 NUDT22Q9BRQ3 303 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 TINAGL1Q9GZM7 467 aaPredicted RBP17.56■□□□□ 0.4
COL13A1-201ENST00000354547 FER1L5A0AVI2 2057 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 METTL12A8MUP2 240 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 LMO7DNF2Z398 122 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 EIF4E2O60573 245 aaKnown RBP17.56■□□□□ 0.4
COL13A1-201ENST00000354547 ZNF823P16415 610 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 HOXD11P31277 338 aaPredicted RBP17.56■□□□□ 0.4
COL13A1-201ENST00000354547 SEC61A1P61619 476 aaKnown RBP17.56■□□□□ 0.4
COL13A1-201ENST00000354547 HNRNPKP61978 463 aaKnown RBP eCLIP17.56■□□□□ 0.4
COL13A1-201ENST00000354547 NKPD1Q17RQ9 610 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 MOGAT2Q3SYC2 334 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 ACBD4Q8NC06 268 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 ZNF248Q8NDW4 579 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 OR2AK2Q8NG84 335 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 ASB17Q8WXJ9 295 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 POFUT1Q9H488 388 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 MED11Q9P086 117 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 OPN4Q9UHM6 478 aa17.56■□□□□ 0.4
COL13A1-201ENST00000354547 A0A1B0GTQ1 180 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 H3BMH7 237 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 ZNF354AO60765 605 aaPredicted RBP17.55■□□□□ 0.4
COL13A1-201ENST00000354547 GLT8D1Q68CQ7 371 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 FAM46BQ96A09 425 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 CXorf58Q96LI9 332 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 IGHV1OR21-1A0A087WYE8 117 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 IGKV1D-43A0A0B4J1Z2 117 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 P2RY10O00398 339 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 OR2A4O95047 310 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 MT-ATP6P00846 226 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 AMY2AP04746 511 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 RRASP10301 218 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 ZNF28P17035 718 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 GABRG1Q8N1C3 465 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 GALNT16Q8N428 558 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 OR2A7Q96R45 310 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 C12orf10Q9HB07 376 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 TAS2R8Q9NYW2 309 aa17.55■□□□□ 0.4
COL13A1-201ENST00000354547 F5H5P2 479 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 SHOXO15266 292 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 ALOX12BO75342 701 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 DXOO77932 396 aaKnown RBP17.54■□□□□ 0.4
COL13A1-201ENST00000354547 RAB3DO95716 219 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 DCAF7P61962 342 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 SORDQ00796 357 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 POU3F1Q03052 451 aaPredicted RBP17.54■□□□□ 0.4
COL13A1-201ENST00000354547 TEX30Q5JUR7 227 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 IDO2Q6ZQW0 420 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 GRINAQ7Z429 371 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 OR4S1Q8NGB4 309 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 STK35Q8TDR2 534 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 SUSD2Q9UGT4 822 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 FBXO4Q9UKT5 387 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 LOC107986453A0A1B0GWG9 222 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 TMEM235A6NFC5 223 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 ZNF217O75362 1048 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 HLXQ14774 488 aaPredicted RBP17.54■□□□□ 0.4
COL13A1-201ENST00000354547 ARSKQ6UWY0 536 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 CATSPERDQ86XM0 798 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 OR6N1Q8NGY5 312 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 OR52N5Q8NH56 324 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 C5orf34Q96MH7 638 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 DHRS9Q9BPW9 319 aa17.54■□□□□ 0.4
COL13A1-201ENST00000354547 FGF21Q9NSA1 209 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms