RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 FAM221AA4D161 298 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 C12orf71A8MTZ7 269 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 GLCEO94923 617 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 RAB36O95755 333 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 HRGP04196 525 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 CECR9P0C854 216 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 PSKH1P11801 424 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 ZNF14P17017 642 aaPredicted RBP19.27■□□□□ 0.67
SHMT1-203ENST00000354098 FMO3P31513 532 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 RPS27P42677 84 aaKnown RBP19.27■□□□□ 0.67
SHMT1-203ENST00000354098 PSG4Q00888 419 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 APOFQ13790 326 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 AADACL4Q5VUY2 407 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 FBXW10Q5XX13 1052 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 TMEM53Q6P2H8 277 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 CORO6Q6QEF8 472 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 ZNF584Q8IVC4 421 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 FAM169BQ8N8A8 192 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 ZNF555Q8NEP9 628 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 OR8J1Q8NGP2 316 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 CYGBQ8WWM9 190 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 ZMYND19Q96E35 227 aaPredicted RBP19.27■□□□□ 0.67
SHMT1-203ENST00000354098 VCXQ9H320 206 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 ESRP2Q9H6T0 727 aaKnown RBP19.27■□□□□ 0.67
SHMT1-203ENST00000354098 IMPAD1Q9NX62 359 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 AASSQ9UDR5 926 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 MOKQ9UQ07 419 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 LHFPL6Q9Y693 200 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 COMMD3-BMI1R4GMX3 469 aa19.27■□□□□ 0.67
SHMT1-203ENST00000354098 PRODHO43272 600 aa19.26■□□□□ 0.67
SHMT1-203ENST00000354098 CLIC3O95833 236 aa19.26■□□□□ 0.67
SHMT1-203ENST00000354098 CD40P25942 277 aa19.26■□□□□ 0.67
SHMT1-203ENST00000354098 RPS7P62081 194 aaKnown RBP19.26■□□□□ 0.67
SHMT1-203ENST00000354098 SPOCK1Q08629 439 aa19.26■□□□□ 0.67
SHMT1-203ENST00000354098 PABPC1L2AQ5JQF8 200 aa19.26■□□□□ 0.67
SHMT1-203ENST00000354098 TMEM108Q6UXF1 575 aa19.26■□□□□ 0.67
SHMT1-203ENST00000354098 DPPA2Q7Z7J5 298 aa19.26■□□□□ 0.67
SHMT1-203ENST00000354098 LINC00346Q8IVM7 164 aa19.26■□□□□ 0.67
SHMT1-203ENST00000354098 OR10H5Q8NGA6 315 aa19.26■□□□□ 0.67
SHMT1-203ENST00000354098 AKR7LQ8NHP1 331 aa19.26■□□□□ 0.67
SHMT1-203ENST00000354098 TEAD3Q99594 435 aa19.26■□□□□ 0.67
SHMT1-203ENST00000354098 TIMM10BQ9Y5J6 103 aa19.26■□□□□ 0.67
SHMT1-203ENST00000354098 CELSR2Q9HCU4 2923 aa19.26■□□□□ 0.67
SHMT1-203ENST00000354098 CCDC182A6NF36 153 aa19.25■□□□□ 0.67
SHMT1-203ENST00000354098 CTAG2O75638 210 aa19.25■□□□□ 0.67
SHMT1-203ENST00000354098 PLAUP00749 431 aa19.25■□□□□ 0.67
SHMT1-203ENST00000354098 PRF1P14222 555 aa19.25■□□□□ 0.67
SHMT1-203ENST00000354098 AQP4P55087 323 aa19.25■□□□□ 0.67
SHMT1-203ENST00000354098 PCBD1P61457 104 aa19.25■□□□□ 0.67
SHMT1-203ENST00000354098 ADAM8P78325 824 aa19.25■□□□□ 0.67
SHMT1-203ENST00000354098 ADARB1P78563 741 aaKnown RBP19.25■□□□□ 0.67
SHMT1-203ENST00000354098 AQP6Q13520 282 aa19.25■□□□□ 0.67
SHMT1-203ENST00000354098 KEAP1Q14145 624 aa19.25■□□□□ 0.67
SHMT1-203ENST00000354098 NXNL2Q5VZ03 156 aa19.25■□□□□ 0.67
SHMT1-203ENST00000354098 SYT9Q86SS6 491 aa19.25■□□□□ 0.67
SHMT1-203ENST00000354098 DHRSXQ8N5I4 330 aa19.25■□□□□ 0.67
SHMT1-203ENST00000354098 CPEB3Q8NE35 698 aaKnown RBP19.25■□□□□ 0.67
SHMT1-203ENST00000354098 OR2H1Q9GZK4 316 aa19.25■□□□□ 0.67
SHMT1-203ENST00000354098 WNT5BQ9H1J7 359 aa19.25■□□□□ 0.67
SHMT1-203ENST00000354098 RASSF1Q9NS23 344 aa19.25■□□□□ 0.67
SHMT1-203ENST00000354098 POLR1DQ9Y2S0 133 aa19.25■□□□□ 0.67
SHMT1-203ENST00000354098 A0A1W2PPR1 153 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 RER1O15258 196 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 ZNF823P16415 610 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 PAX7P23759 505 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 PTAFRP25105 342 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 GSTT1P30711 240 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 TLE4Q04727 773 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 SLC35D3Q5M8T2 416 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 ZNF774Q6NX45 483 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 ENTHD1Q8IYW4 607 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 TRUB1Q8WWH5 349 aaKnown RBP19.24■□□□□ 0.67
SHMT1-203ENST00000354098 ADI1Q9BV57 179 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 CDADC1Q9BWV3 514 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 DNAJC27Q9NZQ0 273 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 H2AFY2Q9P0M6 372 aaPredicted RBP19.24■□□□□ 0.67
SHMT1-203ENST00000354098 CYB5R1Q9UHQ9 305 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 CENPEQ02224 2701 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 ZNF593O00488 134 aaPredicted RBP19.24■□□□□ 0.67
SHMT1-203ENST00000354098 ABCD4O14678 606 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 SERPINA5P05154 406 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 BLVRAP53004 296 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 NR1H2P55055 460 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 MEPCEQ7L2J0 689 aaKnown RBP19.24■□□□□ 0.67
SHMT1-203ENST00000354098 ERI1Q8IV48 349 aaKnown RBP19.24■□□□□ 0.67
SHMT1-203ENST00000354098 PIAS4Q8N2W9 510 aaPredicted RBP19.24■□□□□ 0.67
SHMT1-203ENST00000354098 C14orf79Q96F83 325 aa19.24■□□□□ 0.67
SHMT1-203ENST00000354098 MOV10Q9HCE1 1003 aaKnown RBP19.24■□□□□ 0.67
SHMT1-203ENST00000354098 SELENOFO60613 162 aa19.23■□□□□ 0.67
SHMT1-203ENST00000354098 CD3EP07766 207 aa19.23■□□□□ 0.67
SHMT1-203ENST00000354098 CCL2P13500 99 aa19.23■□□□□ 0.67
SHMT1-203ENST00000354098 GABRB1P18505 474 aa19.23■□□□□ 0.67
SHMT1-203ENST00000354098 APEX1P27695 318 aaKnown RBP19.23■□□□□ 0.67
SHMT1-203ENST00000354098 CALCRP30988 508 aa19.23■□□□□ 0.67
SHMT1-203ENST00000354098 SNRPGP62308 76 aaKnown RBP19.23■□□□□ 0.67
SHMT1-203ENST00000354098 NAAAQ02083 359 aa19.23■□□□□ 0.67
SHMT1-203ENST00000354098 C3orf36Q3SXR2 165 aa19.23■□□□□ 0.67
SHMT1-203ENST00000354098 SLC18B1Q6NT16 456 aa19.23■□□□□ 0.67
SHMT1-203ENST00000354098 ADAM5Q6NVV9 412 aa19.23■□□□□ 0.67
SHMT1-203ENST00000354098 TIGD4Q8IY51 512 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms