RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ZNF626Q68DY1 528 aa5.4□□□□□ -1.54
CLCN3-201ENST00000347613 TMEM65Q6PI78 240 aa5.4□□□□□ -1.54
CLCN3-201ENST00000347613 NAA40Q86UY6 237 aa5.4□□□□□ -1.54
CLCN3-201ENST00000347613 STPG2Q8N412 459 aa5.4□□□□□ -1.54
CLCN3-201ENST00000347613 TSTD1Q8NFU3 115 aa5.4□□□□□ -1.54
CLCN3-201ENST00000347613 OR1N1Q8NGS0 311 aa5.4□□□□□ -1.54
CLCN3-201ENST00000347613 ST7LQ8TDW4 575 aa5.4□□□□□ -1.54
CLCN3-201ENST00000347613 S100A16Q96FQ6 103 aaKnown RBP5.4□□□□□ -1.54
CLCN3-201ENST00000347613 TMEM185BQ9H7F4 350 aa5.4□□□□□ -1.54
CLCN3-201ENST00000347613 MRPS33Q9Y291 106 aaKnown RBP5.4□□□□□ -1.54
CLCN3-201ENST00000347613 LINC00862A6NCI5 91 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 LILRA5A6NI73 299 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 LMO7DNF2Z398 122 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 H3BML4 177 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 H7C417 338 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 EIF1AYO14602 144 aaKnown RBP5.4□□□□□ -1.55
CLCN3-201ENST00000347613 XRCC3O43542 346 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 PIAS2O75928 621 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 TGM6O95932 706 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 IFNGR1P15260 489 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 CXCR1P25024 350 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 CD27P26842 260 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 CDAP32320 146 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 PTGDSP41222 190 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 NXPH1P58417 271 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 RPL27P61353 136 aaKnown RBP5.4□□□□□ -1.55
CLCN3-201ENST00000347613 ADAM8P78325 824 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 LGALS3BPQ08380 585 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 PLCXD2Q0VAA5 305 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 ELOCQ15369 112 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 GLYATL3Q5SZD4 288 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 C1orf140Q5VVS0 124 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 TMEM225Q6GV28 225 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 ANKRD16Q6P6B7 361 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 CRIP3Q6Q6R5 217 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 CHMP1BQ7LBR1 199 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 CATSPERDQ86XM0 798 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 LURAP1LQ8IV03 231 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 UXS1Q8NBZ7 420 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 FAM3DQ96BQ1 224 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 SEH1LQ96EE3 360 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 SFXN2Q96NB2 322 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 LRFN5Q96NI6 719 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 MNTQ99583 582 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 WDR77Q9BQA1 342 aaPredicted RBP5.4□□□□□ -1.55
CLCN3-201ENST00000347613 TRAF4Q9BUZ4 470 aaPredicted RBP5.4□□□□□ -1.55
CLCN3-201ENST00000347613 B3GAT1Q9P2W7 334 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 MTFP1Q9UDX5 166 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 PRODH2Q9UF12 536 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 KLK13Q9UKR3 277 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 PCSK5Q92824 1860 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 TRAV14DV4A0A0A6YYC5 116 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 LY6G6EA0A0G2JKS1 128 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 LOC105371267A0A1B0GV96 52 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 A0A1W2PP11 408 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 ZSCAN5BA6NJL1 495 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 MBTPS2O43462 519 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 NOS1APO75052 506 aaPredicted RBP5.4□□□□□ -1.55
CLCN3-201ENST00000347613 FOSL2P15408 326 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 EIF1AXP47813 144 aaKnown RBP5.4□□□□□ -1.55
CLCN3-201ENST00000347613 MAP2K6P52564 334 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 UNC119Q13432 240 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 EIF2B1Q14232 305 aaKnown RBP5.4□□□□□ -1.55
CLCN3-201ENST00000347613 UBXN2BQ14CS0 331 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 ESCO2Q56NI9 601 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 CDCP2Q5VXM1 449 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 SLC22A10Q63ZE4 541 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 OR52W1Q6IF63 320 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 CLEC1AQ8NC01 280 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 NFAM1Q8NET5 270 aaPredicted RBP5.4□□□□□ -1.55
CLCN3-201ENST00000347613 POC1BQ8TC44 478 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 RNF128Q8TEB7 428 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 NXPE2Q96DL1 559 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 KLHL15Q96M94 604 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 C5orf34Q96MH7 638 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 PRMT8Q9NR22 394 aaPredicted RBP5.4□□□□□ -1.55
CLCN3-201ENST00000347613 TAS2R10Q9NYW0 307 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 SUSD2Q9UGT4 822 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 ING4Q9UNL4 249 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 LHX6Q9UPM6 363 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 U3KQA8 63 aa5.4□□□□□ -1.55
CLCN3-201ENST00000347613 TRAV36DV7A0A075B6V5 113 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 ANXA2P2A6NMY6 339 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 MCRIP1C9JLW8 97 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 P2RY10O00398 339 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 OR2A4O95047 310 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 ANXA2P07355 339 aaKnown RBP5.39□□□□□ -1.55
CLCN3-201ENST00000347613 CALCBP10092 127 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 SLC2A1P11166 492 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF35P13682 527 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF17P17021 662 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF28P17035 718 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 PTGS2P35354 604 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 TSPAN5P62079 268 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 RNF4P78317 190 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 HSD11B2P80365 405 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 OR7A5Q15622 319 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 ELAVL1Q15717 326 aaKnown RBP5.39□□□□□ -1.55
CLCN3-201ENST00000347613 NHLRC3Q5JS37 347 aa5.39□□□□□ -1.55
CLCN3-201ENST00000347613 ALKAL2Q6UX46 152 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms