RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 KLHL13Q9P2N7 655 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 ALG5Q9Y673 324 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 TRGV5A0A0B4J1U4 118 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 A0A0B4J293 547 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 FAM240BA0A1B0GVZ2 78 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 A0A1W2PRG6 482 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 DNPH1O43598 174 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 EIF1BO60739 113 aaKnown RBP13.07□□□□□ -0.32
CXCL12-201ENST00000343575 FGF9P31371 208 aaPredicted RBP13.07□□□□□ -0.32
CXCL12-201ENST00000343575 EIF1AXP47813 144 aaKnown RBP13.07□□□□□ -0.32
CXCL12-201ENST00000343575 SRYQ05066 204 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 TPBGQ13641 420 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 C3AR1Q16581 482 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 LINC01590Q5TEZ4 76 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 PLXDC2Q6UX71 529 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 GPAT4Q86UL3 456 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 OR6V1Q8N148 313 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 OR51L1Q8NGJ5 315 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 OR52I1Q8NGK6 324 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 CREB3L1Q96BA8 519 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 RNFT2Q96EX2 444 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 EMC6Q9BV81 110 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 PLSCR2Q9NRY7 297 aa13.07□□□□□ -0.32
CXCL12-201ENST00000343575 LINC00854A0A1B0GVQ3 168 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 TMEM129A0AVI4 362 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 PRSS37A4D1T9 235 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 LINC00862A6NCI5 91 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 J3QRE1 110 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 ACTL6AO96019 429 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 SPI1P17947 270 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 NTF4P34130 210 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 SLC17A1Q14916 467 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 KLHL12Q53G59 568 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 LYPD4Q6UWN0 246 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 SHFQ7M4L6 423 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 JAZF1Q86VZ6 243 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 GID4Q8IVV7 300 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 PM20D2Q8IYS1 436 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 ZIC4Q8N9L1 334 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 OR4F15Q8NGB8 312 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 ZCCHC14Q8WYQ9 949 aaKnown RBP13.06□□□□□ -0.32
CXCL12-201ENST00000343575 ROBO4Q8WZ75 1007 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 CITED4Q96RK1 184 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 KCNK17Q96T54 332 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 ZNF649Q9BS31 505 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 SYT4Q9H2B2 425 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 PPP1R3EQ9H7J1 279 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 VSX1Q9NZR4 365 aaPredicted RBP13.06□□□□□ -0.32
CXCL12-201ENST00000343575 ING1Q9UK53 422 aaPredicted RBP13.06□□□□□ -0.32
CXCL12-201ENST00000343575 PIEZO2Q9H5I5 2752 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 A0A1B0GVC2 190 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 ZNF716A6NP11 495 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 ZNHIT1O43257 154 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 LYRM1O43325 122 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 FAM87AP0C7U9 286 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 SLC25A1P53007 311 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 POU4F3Q15319 338 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 LIPKQ5VXJ0 399 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 RPUSD3Q6P087 351 aaKnown RBP13.06□□□□□ -0.32
CXCL12-201ENST00000343575 UTS2BQ765I0 119 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 UEVLDQ8IX04 471 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 Q8N402 240 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 AKAP1Q92667 903 aaKnown RBP eCLIP13.06□□□□□ -0.32
CXCL12-201ENST00000343575 RFKQ969G6 155 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 WDYHV1Q96HA8 205 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 ZNF385AQ96PM9 386 aaKnown RBP13.06□□□□□ -0.32
CXCL12-201ENST00000343575 MRPL13Q9BYD1 178 aaKnown RBP13.06□□□□□ -0.32
CXCL12-201ENST00000343575 HAO2Q9NYQ3 351 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 H2AFY2Q9P0M6 372 aaPredicted RBP13.06□□□□□ -0.32
CXCL12-201ENST00000343575 LUZP4Q9P127 313 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 RASD1Q9Y272 281 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 EXOGQ9Y2C4 368 aaKnown RBP13.06□□□□□ -0.32
CXCL12-201ENST00000343575 SPEF1Q9Y4P9 236 aa13.06□□□□□ -0.32
CXCL12-201ENST00000343575 IGKV1D-43A0A0B4J1Z2 117 aa13.05□□□□□ -0.32
CXCL12-201ENST00000343575 SLC22A23A1A5C7 686 aa13.05□□□□□ -0.32
CXCL12-201ENST00000343575 FAM171A2A8MVW0 826 aa13.05□□□□□ -0.32
CXCL12-201ENST00000343575 NPIPA5E9PKD4 350 aa13.05□□□□□ -0.32
CXCL12-201ENST00000343575 SLC19A2O60779 497 aa13.05□□□□□ -0.32
CXCL12-201ENST00000343575 PAICSP22234 425 aaKnown RBP13.05□□□□□ -0.32
CXCL12-201ENST00000343575 INPP1P49441 399 aa13.05□□□□□ -0.32
CXCL12-201ENST00000343575 BIDP55957 195 aa13.05□□□□□ -0.32
CXCL12-201ENST00000343575 WNT4P56705 351 aa13.05□□□□□ -0.32
CXCL12-201ENST00000343575 RAB40BQ12829 278 aa13.05□□□□□ -0.32
CXCL12-201ENST00000343575 ABLIM2Q6H8Q1 611 aa13.05□□□□□ -0.32
CXCL12-201ENST00000343575 UFD1Q92890 307 aa13.05□□□□□ -0.32
CXCL12-201ENST00000343575 TRMT61AQ96FX7 289 aaKnown RBP13.05□□□□□ -0.32
CXCL12-201ENST00000343575 LDAHQ9H6V9 325 aa13.05□□□□□ -0.32
CXCL12-201ENST00000343575 SRA1Q9HD15 236 aaKnown RBP13.05□□□□□ -0.32
CXCL12-201ENST00000343575 FGF20Q9NP95 211 aaPredicted RBP13.05□□□□□ -0.32
CXCL12-201ENST00000343575 ZNF71Q9NQZ8 489 aaPredicted RBP13.05□□□□□ -0.32
CXCL12-201ENST00000343575 CLEC2DQ9UHP7 191 aa13.05□□□□□ -0.32
CXCL12-201ENST00000343575 NPIPA1Q9UND3 350 aa13.05□□□□□ -0.32
CXCL12-201ENST00000343575 ING4Q9UNL4 249 aa13.05□□□□□ -0.32
CXCL12-201ENST00000343575 EXOSC1Q9Y3B2 195 aaKnown RBP13.05□□□□□ -0.32
CXCL12-201ENST00000343575 PRRC2CQ9Y520 2896 aaKnown RBP13.05□□□□□ -0.32
CXCL12-201ENST00000343575 A0A0X1KG70 313 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 VAMP5O95183 116 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 FAM157BP0CG42 384 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 PSKH1P11801 424 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 CPN1P15169 458 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms