RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 SEMA6CQ9H3T2 930 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 RARRES3Q9UL19 164 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 WASF3Q9UPY6 502 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 ZNF705GA8MUZ8 300 aaPredicted RBP13.51□□□□□ -0.25
RRP1B-201ENST00000340648 NPIPB8E9PQR5 432 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 GALR3O60755 368 aaPredicted RBP13.51□□□□□ -0.25
RRP1B-201ENST00000340648 ZFPL1O95159 310 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 OR4N2Q8NGD1 307 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 JAM3Q9BX67 310 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 A8MVM7 634 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 PXNP49023 591 aaPredicted RBP13.51□□□□□ -0.25
RRP1B-201ENST00000340648 C19orf57Q0VDD7 668 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 FIP1L1Q6UN15 594 aaKnown RBP13.51□□□□□ -0.25
RRP1B-201ENST00000340648 MUC20Q8N307 709 aaPredicted RBP13.51□□□□□ -0.25
RRP1B-201ENST00000340648 OR2L13Q8N349 312 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 OR14A16Q8NHC5 309 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 CCDC85CA6NKD9 419 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 BCL2L11O43521 198 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 HPXP02790 462 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 OR13C7P0DN81 318 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 MTCP1P56278 107 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 TMEM81Q6P7N7 255 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 SLC30A7Q8NEW0 376 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 TRAF4Q9BUZ4 470 aaPredicted RBP13.5□□□□□ -0.25
RRP1B-201ENST00000340648 TINAGL1Q9GZM7 467 aaPredicted RBP13.5□□□□□ -0.25
RRP1B-201ENST00000340648 LSM2Q9Y333 95 aaKnown RBP13.5□□□□□ -0.25
RRP1B-201ENST00000340648 A0A087WV62 115 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 TRBV11-1A0A0K0K1C0 115 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 RRASP10301 218 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 ZNF44P15621 663 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 RPS18P62269 152 aaKnown RBP13.5□□□□□ -0.25
RRP1B-201ENST00000340648 MALLQ13021 153 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 LGALSLQ3ZCW2 172 aaPredicted RBP13.5□□□□□ -0.25
RRP1B-201ENST00000340648 TMEM215Q68D42 235 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 RTL6Q6ICC9 239 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 BAP18Q8IXM2 172 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 CA13Q8N1Q1 262 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 SLC37A2Q8TED4 501 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 ARL5BQ96KC2 179 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 ZNF578Q96N58 590 aaPredicted RBP13.5□□□□□ -0.25
RRP1B-201ENST00000340648 RFPL4AA6NLU0 287 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 RFPL4AL1F8VTS6 287 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 TSTD3H0UI37 97 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 GLSO94925 669 aaPredicted RBP13.5□□□□□ -0.25
RRP1B-201ENST00000340648 HOXC8P31273 242 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 HRH1P35367 487 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 BTG2P78543 158 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 TMEM71Q6P5X7 295 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 ZNF547Q8IVP9 402 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 RSC1A1Q92681 617 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 SLC25A31Q9H0C2 315 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 OR5V1Q9UGF6 321 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 PURGQ9UJV8 347 aaKnown RBP13.5□□□□□ -0.25
RRP1B-201ENST00000340648 SEMG1P04279 462 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 NDUFA6P56556 154 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 EGR3Q06889 387 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 CNN3Q15417 329 aaKnown RBP13.5□□□□□ -0.25
RRP1B-201ENST00000340648 CDKN3Q16667 212 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 ARIH2OSQ8N7S6 290 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 OR4S1Q8NGB4 309 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 EMC6Q9BV81 110 aa13.5□□□□□ -0.25
RRP1B-201ENST00000340648 GNB3P16520 340 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 OGFOD3Q6PK18 319 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 C16orf52Q8NHV5 167 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 MARCH1Q8TCQ1 289 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 ZNF775Q96BV0 537 aaPredicted RBP13.49□□□□□ -0.25
RRP1B-201ENST00000340648 OR11A1Q9GZK7 315 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 FBXO34Q9NWN3 711 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 TCRBV16S1A1N1A0A5B0 115 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 NME2P1O60361 137 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 GCM2O75603 506 aaPredicted RBP13.49□□□□□ -0.25
RRP1B-201ENST00000340648 BPNT1O95861 308 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 DRD1P21728 446 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 FASLGP48023 281 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 ADPRHP54922 357 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 TMEM91Q6ZNR0 172 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 SPPL3Q8TCT6 385 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 RNF128Q8TEB7 428 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 PIGTQ969N2 578 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 METTL9Q9H1A3 318 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 PPP1R3EQ9H7J1 279 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 GFOD1Q9NXC2 390 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 OR2W5A6NFC9 320 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 CEACAM5P06731 702 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 AVPR2P30518 371 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 YPEL5P62699 121 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 SLC17A1Q14916 467 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 TMEM176BQ3YBM2 270 aaPredicted RBP13.49□□□□□ -0.25
RRP1B-201ENST00000340648 MANEAQ5SRI9 462 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 WDR88Q6ZMY6 472 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 BPHLQ86WA6 291 aaPredicted RBP13.49□□□□□ -0.25
RRP1B-201ENST00000340648 A0A0B4J2E0 115 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 A0A1B0GX12 115 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 MCRIP1C9JLW8 97 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 SDCBPO00560 298 aaPredicted RBP13.49□□□□□ -0.25
RRP1B-201ENST00000340648 BAMBIQ13145 260 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 CAMK2BQ13554 666 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 ELFN2Q5R3F8 820 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 LYG2Q86SG7 212 aa13.49□□□□□ -0.25
RRP1B-201ENST00000340648 BPIFCQ8NFQ6 507 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms