RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 MAMDC2Q7Z304 686 aaPredicted RBP9.7□□□□□ -0.86
RTN3-201ENST00000338850 MISPQ8IVT2 679 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 GLB1L2Q8IW92 636 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 OR2T35Q8NGX2 323 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 ZNF519Q8TB69 540 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 STK35Q8TDR2 534 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 RNF128Q8TEB7 428 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 EXTL1Q92935 676 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 ADIPOR1Q96A54 375 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 ADAD1Q96M93 576 aaKnown RBP9.7□□□□□ -0.86
RTN3-201ENST00000338850 TSPAN32Q96QS1 320 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 SLC38A3Q99624 504 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 DDA1Q9BW61 102 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 GSX2Q9BZM3 304 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 OCIAD1Q9NX40 245 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 GLTPQ9NZD2 209 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 FRRS1LQ9P0K9 344 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 PIPOXQ9P0Z9 390 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 LAMP5Q9UJQ1 280 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 MRPS7Q9Y2R9 242 aaKnown RBP9.7□□□□□ -0.86
RTN3-201ENST00000338850 B3GALT1Q9Y5Z6 326 aa9.7□□□□□ -0.86
RTN3-201ENST00000338850 UBE2QL1A1L167 161 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 GGT3PA6NGU5 568 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 ANXA2P2A6NMY6 339 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 C17orf105B2RV13 164 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 H3BMH7 237 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 HRKO00198 91 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 DUX1O43812 170 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 TSPAN2O60636 221 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 B3GALNT1O75752 331 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 HPXP02790 462 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 HIST1H2ABP04908 130 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 ANXA2P07355 339 aaKnown RBP9.69□□□□□ -0.86
RTN3-201ENST00000338850 OR8G3PP0DMU2 310 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 PGCP20142 388 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 MPZP25189 248 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 VEGFCP49767 419 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 MAP2K6P52564 334 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 PNLIPRP2P54317 469 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 EXOSC2Q13868 293 aaKnown RBP9.69□□□□□ -0.86
RTN3-201ENST00000338850 CBFBQ13951 182 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 SLC17A1Q14916 467 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 MFSD13AQ14CX5 517 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 TOMM34Q15785 309 aaPredicted RBP9.69□□□□□ -0.86
RTN3-201ENST00000338850 TBR1Q16650 682 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 DEFB110Q30KQ9 67 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 SDK2Q58EX2 2172 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 TOR2AQ5JU69 321 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 DEGS2Q6QHC5 323 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 WDR74Q6RFH5 385 aaPredicted RBP9.69□□□□□ -0.86
RTN3-201ENST00000338850 LYPD8Q6UX82 237 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 APOOLQ6UXV4 268 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 ESPNLQ6ZVH7 1005 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 HIST3H2AQ7L7L0 130 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 SYT9Q86SS6 491 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 ADGRG3Q86Y34 549 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 ZNF679Q8IYX0 411 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 BMPERQ8N8U9 685 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 OR51L1Q8NGJ5 315 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 PHOSPHO1Q8TCT1 267 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 DOK4Q8TEW6 326 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 PTPMT1Q8WUK0 201 aaPredicted RBP9.69□□□□□ -0.86
RTN3-201ENST00000338850 HIST1H2ACQ93077 130 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 NKD1Q969G9 470 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 MOGAT1Q96PD6 335 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 NUDT16L1Q9BRJ7 211 aaKnown RBP9.69□□□□□ -0.86
RTN3-201ENST00000338850 C1orf198Q9H425 327 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 NOX3Q9HBY0 568 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 PDE7BQ9NP56 450 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 SLC39A1Q9NY26 324 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 MGAT4CQ9UBM8 478 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 KLHDC2Q9Y2U9 406 aa9.69□□□□□ -0.86
RTN3-201ENST00000338850 MYO18BQ8IUG5 2567 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 LOC100289279A0A1B0GTE1 492 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 A0A1B0GVC2 190 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 LOC390937A0A1W2PQ73 354 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 TCRBV16S1A1N1A0A5B0 115 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 CIB4A0PJX0 185 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 A6NIN4 97 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 ARPC1BO15143 372 aaKnown RBP9.68□□□□□ -0.86
RTN3-201ENST00000338850 DOK2O60496 412 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 CTAG2O75638 210 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 RBBP9O75884 186 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 AQP8O94778 261 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 MPC2O95563 127 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 DDAH2O95865 285 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 FAM87AP0C7U9 286 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 AKAIN1P0CW23 69 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 GABRA1P14867 456 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 TACR3P29371 465 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 ZNF81P51508 661 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 SUMO3P55854 103 aaPredicted RBP9.68□□□□□ -0.86
RTN3-201ENST00000338850 RAB14P61106 215 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 RPL27P61353 136 aaKnown RBP9.68□□□□□ -0.86
RTN3-201ENST00000338850 BTG2P78543 158 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 SRSF4Q08170 494 aaKnown RBP9.68□□□□□ -0.86
RTN3-201ENST00000338850 ZP4Q12836 540 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 PCK2Q16822 640 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 NDUFAF6Q330K2 333 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 FAM209AQ5JX71 171 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms