RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 HSFX1Q9UBD0 423 aa12.55□□□□□ -0.4
CLCN6-201ENST00000312413 PISDQ9UG56 409 aa12.55□□□□□ -0.4
CLCN6-201ENST00000312413 FLVCR1Q9Y5Y0 555 aa12.55□□□□□ -0.4
CLCN6-201ENST00000312413 CTXN2P0C2S0 81 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 SLC2A1P11166 492 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 DTYMKP23919 212 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 UBE2MP61081 183 aaKnown RBP12.54□□□□□ -0.4
CLCN6-201ENST00000312413 RPL27P61353 136 aaKnown RBP12.54□□□□□ -0.4
CLCN6-201ENST00000312413 TMEM88Q6PEY1 159 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 LCN15Q6UWW0 184 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 SIGLECL1Q8N7X8 197 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 CLRN3Q8NCR9 226 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 OR2AK2Q8NG84 335 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 OR10J5Q8NHC4 309 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 YIPF6Q96EC8 236 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 DUSP23Q9BVJ7 150 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 RNF150Q9ULK6 438 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 LOC107986453A0A1B0GWG9 222 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 VAMP3Q15836 100 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 H2BFWTQ7Z2G1 175 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 STT3BQ8TCJ2 826 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 FAM122AQ96E09 287 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 LMAN1LQ9HAT1 526 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 CREBZFQ9NS37 354 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 NTNG1Q9Y2I2 539 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 ICAM2P13598 275 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 NME1P15531 152 aaKnown RBP12.54□□□□□ -0.4
CLCN6-201ENST00000312413 OR10A3P58181 314 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 YPEL5P62699 121 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 ZNF85Q03923 595 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 SEMA3BQ13214 749 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 CLEC9AQ6UXN8 241 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 FLVCR2Q9UPI3 526 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 PLPP1O14494 284 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 CTNSO60931 367 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 TPOP07202 933 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 CTRB1P17538 263 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 CD38P28907 300 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 DOC2BQ14184 412 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 CTRB2Q6GPI1 263 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 H1FNTQ75WM6 255 aaPredicted RBP12.54□□□□□ -0.4
CLCN6-201ENST00000312413 NECAP1Q8NC96 275 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 OR5B3Q8NH48 314 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 NAT6Q93015 286 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 SLC35A4Q96G79 324 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 OPALINQ96PE5 141 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 ZNF2Q9BSG1 426 aaPredicted RBP12.54□□□□□ -0.4
CLCN6-201ENST00000312413 SPNS1Q9H2V7 528 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 OR51I2Q9H344 312 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 TMPRSS5Q9H3S3 457 aa12.54□□□□□ -0.4
CLCN6-201ENST00000312413 ZNF816-ZNF321PA0A0X1KG74 233 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 ENPP1P22413 925 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 ZNF626Q68DY1 528 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 DHRS4L2Q6PKH6 230 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 TCTE3Q8IZS6 198 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 ZNF321PQ8N8H1 164 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 LRFN5Q96NI6 719 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 DUSP22Q9NRW4 184 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 DNMT3BQ9UBC3 853 aaKnown RBP12.53□□□□□ -0.4
CLCN6-201ENST00000312413 COL2A1P02458 1487 aaPredicted RBP12.53□□□□□ -0.4
CLCN6-201ENST00000312413 ZC3H12DA2A288 527 aaKnown RBP12.53□□□□□ -0.4
CLCN6-201ENST00000312413 E5RGE8 158 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 EIF4EP06730 217 aaKnown RBP12.53□□□□□ -0.4
CLCN6-201ENST00000312413 SNRPNP63162 240 aaKnown RBP12.53□□□□□ -0.4
CLCN6-201ENST00000312413 GTF2H5Q6ZYL4 71 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 CMTM4Q8IZR5 234 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 ANKRD53Q8N9V6 530 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 OR4F5Q8NH21 305 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 RHBDD1Q8TEB9 315 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 OR4F4Q96R69 305 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 NSG2Q9Y328 171 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 MMACHCQ9Y4U1 282 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 CBY3A6NI87 242 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 IGFBP1P08833 259 aaPredicted RBP12.53□□□□□ -0.4
CLCN6-201ENST00000312413 OR4E1P0C645 316 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 NID1P14543 1247 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 CD46P15529 392 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 BCL6P41182 706 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 SSR4P51571 173 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 FABP5Q01469 135 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 SYS1Q8N2H4 156 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 ASB13Q8WXK3 278 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 SHARPINQ9H0F6 387 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 GAR1Q9NY12 217 aaKnown RBP12.53□□□□□ -0.4
CLCN6-201ENST00000312413 ZNF230Q9UIE0 474 aaPredicted RBP12.53□□□□□ -0.4
CLCN6-201ENST00000312413 RFPL4AA6NLU0 287 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 RFPL4AL1F8VTS6 287 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 HOXC11O43248 304 aaPredicted RBP12.53□□□□□ -0.4
CLCN6-201ENST00000312413 EFSO43281 561 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 TMEM11P17152 192 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 ADAMTSL4Q6UY14 1074 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 TFAP2EQ6VUC0 442 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 RTL10Q7L3V2 364 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 MFSD4AQ8N468 514 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 OR13D1Q8NGV5 346 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 LHX4Q969G2 390 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 FBXW5Q969U6 566 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 HHIPQ96QV1 700 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 CDCA3Q99618 268 aaPredicted RBP12.53□□□□□ -0.4
CLCN6-201ENST00000312413 FAM173AQ9BQD7 235 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms