RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 OR8G1Q15617 311 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 IER5LQ5T953 404 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 WWTR1Q9GZV5 400 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 K7ERQ8 282 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 NCR1O76036 304 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 ASAH1Q13510 395 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 LYRM4Q9HD34 91 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 FANCMQ8IYD8 2048 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 MYO7BQ6PIF6 2116 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 TMEM25Q86YD3 366 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 EDARADDQ8WWZ3 215 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 CMTM3Q96MX0 182 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 IKZF5Q9H5V7 419 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 TMEM129A0AVI4 362 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 CD68P34810 354 aaPredicted RBP14.25□□□□□ -0.13
HCFC1-201ENST00000310441 EGR3Q06889 387 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 PHLDA2Q53GA4 152 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 C15orf39Q6ZRI6 1047 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 SLC35D2Q76EJ3 337 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 ZNF761Q86XN6 746 aaPredicted RBP14.25□□□□□ -0.13
HCFC1-201ENST00000310441 H1FXQ92522 213 aaKnown RBP14.25□□□□□ -0.13
HCFC1-201ENST00000310441 AKR1E2Q96JD6 320 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 ACOD1A6NK06 481 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 DOK2O60496 412 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 RPS25P62851 125 aaKnown RBP14.25□□□□□ -0.13
HCFC1-201ENST00000310441 ZNF154Q13106 437 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 SHHQ15465 462 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 GPRIN1Q7Z2K8 1008 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 SNAI1O95863 264 aaPredicted RBP14.25□□□□□ -0.13
HCFC1-201ENST00000310441 USF1P22415 310 aaPredicted RBP14.25□□□□□ -0.13
HCFC1-201ENST00000310441 FCRL6Q6DN72 434 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 OR2AK2Q8NG84 335 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 OR52I1Q8NGK6 324 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 C11orf40Q8WZ69 217 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 ZNF845Q96IR2 970 aaPredicted RBP14.25□□□□□ -0.13
HCFC1-201ENST00000310441 WDR61Q9GZS3 305 aaKnown RBP14.25□□□□□ -0.13
HCFC1-201ENST00000310441 OR8G3PP0DMU2 310 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 RRASP10301 218 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 PIPP12273 146 aaPredicted RBP14.24□□□□□ -0.13
HCFC1-201ENST00000310441 ZNF480Q8WV37 535 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 CPPED1Q9BRF8 314 aaPredicted RBP14.24□□□□□ -0.13
HCFC1-201ENST00000310441 VAMP8Q9BV40 100 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 CSAG2Q9Y5P2 127 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 TEX50A0A1B0GTY4 177 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 TLCD2A6NGC4 264 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 ATXN1LP0C7T5 689 aaKnown RBP14.24□□□□□ -0.13
HCFC1-201ENST00000310441 C18orf21Q32NC0 220 aaPredicted RBP14.24□□□□□ -0.13
HCFC1-201ENST00000310441 MARCH8Q5T0T0 291 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 SYT9Q86SS6 491 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 COMMD1Q8N668 190 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 TOE1Q96GM8 510 aaKnown RBP14.24□□□□□ -0.13
HCFC1-201ENST00000310441 NTN4Q9HB63 628 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 ACHEP22303 614 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 NPY4RP50391 375 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 SLC5A10A0PJK1 596 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 TIMP1P01033 207 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 ZP2Q05996 745 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 GTDC1Q4AE62 458 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 TRNP1Q6NT89 227 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 ZNF561Q8N587 486 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 CHST14Q8NCH0 376 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 NOL4LQ96MY1 436 aaPredicted RBP14.24□□□□□ -0.13
HCFC1-201ENST00000310441 GSX2Q9BZM3 304 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 LRIT1Q9P2V4 623 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 RREB1Q92766 1687 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 DBX1A6NMT0 343 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 RRP8O43159 456 aaKnown RBP14.24□□□□□ -0.13
HCFC1-201ENST00000310441 H1FNTQ75WM6 255 aaPredicted RBP14.24□□□□□ -0.13
HCFC1-201ENST00000310441 CRYBG1Q9Y4K1 1723 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 CYB561P49447 251 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 HSF1Q00613 529 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 LTC4SQ16873 150 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 ADAMTSL4Q6UY14 1074 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 PIWIL3Q7Z3Z3 882 aaKnown RBP14.24□□□□□ -0.13
HCFC1-201ENST00000310441 WDTC1Q8N5D0 677 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 FAM234AQ9H0X4 552 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 PCED1AQ9H1Q7 454 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 BCO1Q9HAY6 547 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 TMEM189-UBE2V1I3L0A0 370 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 ARPC3O15145 178 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 CSO75390 466 aaKnown RBP14.24□□□□□ -0.13
HCFC1-201ENST00000310441 CXCL12P48061 93 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 IHHQ14623 411 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 LSRQ86X29 649 aaPredicted RBP14.24□□□□□ -0.13
HCFC1-201ENST00000310441 HSD17B8Q92506 261 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 TMIGD2Q96BF3 282 aa14.24□□□□□ -0.13
HCFC1-201ENST00000310441 LRP6O75581 1613 aa14.23□□□□□ -0.13
HCFC1-201ENST00000310441 NLRC3Q7RTR2 1065 aa14.23□□□□□ -0.13
HCFC1-201ENST00000310441 ABI3BPQ7Z7G0 1075 aa14.23□□□□□ -0.13
HCFC1-201ENST00000310441 PTRH1Q86Y79 214 aaKnown RBP14.23□□□□□ -0.13
HCFC1-201ENST00000310441 ADGRF3Q8IZF5 1079 aa14.23□□□□□ -0.13
HCFC1-201ENST00000310441 AAMDCQ9H7C9 122 aa14.23□□□□□ -0.13
HCFC1-201ENST00000310441 SERTM2A0A1B0GWG4 89 aa14.23□□□□□ -0.13
HCFC1-201ENST00000310441 FZD9O00144 591 aa14.23□□□□□ -0.13
HCFC1-201ENST00000310441 TPOP07202 933 aa14.23□□□□□ -0.13
HCFC1-201ENST00000310441 ZNF727A8MUV8 499 aa14.23□□□□□ -0.13
HCFC1-201ENST00000310441 H0YGG7 62 aa14.23□□□□□ -0.13
HCFC1-201ENST00000310441 RNASEK-C17orf49H0YIS7 233 aa14.23□□□□□ -0.13
HCFC1-201ENST00000310441 SLC35E2P0CK97 266 aa14.23□□□□□ -0.13
HCFC1-201ENST00000310441 FOXK2Q01167 660 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms