RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 CLEC1BQ9P126 229 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 AIPO00170 330 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 MTRF1O75570 445 aaKnown RBP11.49□□□□□ -0.57
RETREG3-201ENST00000309428 ITGA5P08648 1049 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 HOXD4P09016 255 aaPredicted RBP11.49□□□□□ -0.57
RETREG3-201ENST00000309428 TOMM34Q15785 309 aaPredicted RBP11.49□□□□□ -0.57
RETREG3-201ENST00000309428 TMEM184AQ6ZMB5 413 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 STAC2Q6ZMT1 411 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 SLC35F3Q8IY50 421 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 OR1J2Q8NGS2 313 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 OR13C9Q8NGT0 318 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 OR2I1PQ8NGU4 316 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 OR10AC1Q8NH08 325 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 ST7LQ8TDW4 575 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 FAM3DQ96BQ1 224 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 MRPL38Q96DV4 380 aaKnown RBP11.49□□□□□ -0.57
RETREG3-201ENST00000309428 PHB2Q99623 299 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 OR5V1Q9UGF6 321 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 KIF25Q9UIL4 384 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 CSF2RBP32927 897 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 SLC6A9P48067 706 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 SNRPEP62304 92 aaKnown RBP11.49□□□□□ -0.57
RETREG3-201ENST00000309428 PSG6Q00889 435 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 HACD4Q5VWC8 232 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 BVESQ8NE79 360 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 NPAS1Q99742 590 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 SELENOIQ9C0D9 397 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 SCPEP1Q9HB40 452 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 PRR13Q9NZ81 148 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 ZNF175Q9Y473 711 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 TXNDC12O95881 172 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 JMJD7P0C870 316 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 GABRA1P14867 456 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 ZP1P60852 638 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 ZNF85Q03923 595 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 BAMBIQ13145 260 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 CD226Q15762 336 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 ARHGAP11BQ3KRB8 267 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 LINC00346Q8IVM7 164 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 NUDCD2Q8WVJ2 157 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 ZNF649Q9BS31 505 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 SLCO1C1Q9NYB5 712 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 PRELID3BQ9Y3B1 194 aa11.49□□□□□ -0.57
RETREG3-201ENST00000309428 OR5K3A6NET4 321 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 ZNF20P17024 532 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 TACR3P29371 465 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 FLI1Q01543 452 aaPredicted RBP11.48□□□□□ -0.57
RETREG3-201ENST00000309428 CORO6Q6QEF8 472 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 ZNF550Q7Z398 422 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 TMEM200AQ86VY9 491 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 ELSPBP1Q96BH3 223 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 C8orf44Q96CB5 159 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 PFDN5Q99471 154 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 KCNJ15Q99712 375 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 EMC6Q9BV81 110 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 LRRC61Q9BV99 259 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 ADGRL4Q9HBW9 690 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 PDE7BQ9NP56 450 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 SIGLEC7Q9Y286 467 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 TMEM184BQ9Y519 407 aaPredicted RBP11.48□□□□□ -0.57
RETREG3-201ENST00000309428 URGCP-MRPS24S4R325 110 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 BDP1A6H8Y1 2624 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 METTL12A8MUP2 240 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 PLPP2O43688 288 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 SPI1P17947 270 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 RPS27AP62979 156 aaKnown RBP11.48□□□□□ -0.57
RETREG3-201ENST00000309428 UBA52P62987 128 aaKnown RBP11.48□□□□□ -0.57
RETREG3-201ENST00000309428 AVPI1Q5T686 147 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 OR52W1Q6IF63 320 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 OR2L13Q8N349 312 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 ARIH2OSQ8N7S6 290 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 ZNF417Q8TAU3 575 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 TOMM40LQ969M1 308 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 ARHGDIGQ99819 225 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 INPP5EQ9NRR6 644 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 ZNF629Q9UEG4 869 aaPredicted RBP11.48□□□□□ -0.57
RETREG3-201ENST00000309428 OR6C68A6NDL8 312 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 GGT3PA6NGU5 568 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 APOC1P02654 83 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 OR4E1P0C645 316 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 CPT2P23786 658 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 NPY4RP50391 375 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 GPR143P51810 404 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 PRICKLE4Q2TBC4 344 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 MANEAQ5SRI9 462 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 LANCL3Q6ZV70 420 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 MDGA2Q7Z553 956 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 PM20D2Q8IYS1 436 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 PRSS27Q9BQR3 290 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 FBRSQ9HAH7 460 aa11.48□□□□□ -0.57
RETREG3-201ENST00000309428 PRAMEF26H0Y7S4 382 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 H0YIG0 161 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 SNAPINO95295 136 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 PMP2P02689 132 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 ERGP11308 486 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 S100A2P29034 98 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 BDKRB2P30411 391 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 DHPSP49366 369 aaPredicted RBP11.47□□□□□ -0.57
RETREG3-201ENST00000309428 ALKBH1Q13686 389 aaKnown RBP11.47□□□□□ -0.57
RETREG3-201ENST00000309428 ELP5Q8TE02 316 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms