RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 CSNK2A3Q8NEV1 391 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 OR2M3Q8NG83 312 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 OR52H1Q8NGJ2 320 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 OR5D18Q8NGL1 313 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 TMEM171Q8WVE6 324 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 ABHD17AQ96GS6 310 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 V9GY05 133 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 DOCK8Q8NF50 2099 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 TRIM64A6NGJ6 449 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 PSKH1P11801 424 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 RBMXP38159 391 aaKnown RBP8.32□□□□□ -1.08
PTPRE-202ENST00000306042 PCOLCEQ15113 449 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 TOMM34Q15785 309 aaPredicted RBP8.32□□□□□ -1.08
PTPRE-202ENST00000306042 KDM4DQ6B0I6 523 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 SPACA3Q8IXA5 215 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 AKR7LQ8NHP1 331 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 WACQ9BTA9 647 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 MRI1Q9BV20 369 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 MED28Q9H204 178 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 COPZ2Q9P299 210 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 TRAPPC4Q9Y296 219 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 GREB1Q4ZG55 1949 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 MCRIP1C9JLW8 97 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 GNAO1P09471 354 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 ANK1P16157 1881 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 NDUFB7P17568 137 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 ZFP36L1Q07352 338 aaKnown RBP8.32□□□□□ -1.08
PTPRE-202ENST00000306042 ALKBH1Q13686 389 aaKnown RBP8.32□□□□□ -1.08
PTPRE-202ENST00000306042 RBM39Q14498 530 aaKnown RBP8.32□□□□□ -1.08
PTPRE-202ENST00000306042 P2RY14Q15391 338 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 GDPGP1Q6ZNW5 385 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 DOK3Q7L591 496 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 BCDIN3DQ7Z5W3 292 aaKnown RBP8.32□□□□□ -1.08
PTPRE-202ENST00000306042 C12orf43Q96C57 262 aaKnown RBP8.32□□□□□ -1.08
PTPRE-202ENST00000306042 RHBDL2Q9NX52 303 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 DTX4Q9Y2E6 619 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 C9orf172C9J069 976 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 SLC34A2O95436 690 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 TMBIM6P55061 237 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 RNASE10Q5GAN6 216 aaKnown RBP8.32□□□□□ -1.08
PTPRE-202ENST00000306042 CDCP2Q5VXM1 449 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 CALHM3Q86XJ0 350 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 SERPINA12Q8IW75 414 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 DEFB108BQ8NET1 73 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 PIGTQ969N2 578 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 SLCO4A1Q96BD0 722 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 FGGYQ96C11 551 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 SLC6A7Q99884 636 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 OPA3Q9H6K4 179 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 TP53TG5Q9Y2B4 290 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 NTN3O00634 580 aaPredicted RBP8.32□□□□□ -1.08
PTPRE-202ENST00000306042 CDAP32320 146 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 AQP6Q13520 282 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 POU4F3Q15319 338 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 ELFN2Q5R3F8 820 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 GDPD3Q7L5L3 318 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 NLRC3Q7RTR2 1065 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 TUSC5Q8IXB3 177 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 FAM71CQ8NEG0 241 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 OR5H2Q8NGV7 314 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 ZDHHC16Q969W1 377 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 RFT1Q96AA3 541 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 MOB1AQ9H8S9 216 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 HINT3Q9NQE9 182 aaKnown RBP8.32□□□□□ -1.08
PTPRE-202ENST00000306042 PTTG3PQ9NZH4 202 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 PTTG2Q9NZH5 202 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 CCL27Q9Y4X3 112 aa8.32□□□□□ -1.08
PTPRE-202ENST00000306042 IGHV3-64DA0A0J9YX35 117 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 ASPDHA6ND91 283 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 ACOD1A6NK06 481 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 CDX4O14627 284 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-202ENST00000306042 CNOT4O95628 575 aaKnown RBP8.31□□□□□ -1.08
PTPRE-202ENST00000306042 SBK2P0C263 348 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 PVALBP20472 110 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-202ENST00000306042 CDK10Q15131 360 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 Q499Y3 187 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 BHLHA15Q7RTS1 189 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-202ENST00000306042 MSRB3Q8IXL7 192 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 ZNF420Q8TAQ5 688 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-202ENST00000306042 HINT2Q9BX68 163 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 BARX1Q9HBU1 254 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-202ENST00000306042 TRAPPC2LQ9UL33 140 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 C16orf97H3BN30 126 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 TNFRSF1AP19438 455 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 PTPN6P29350 595 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 ACTBP60709 375 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 ACTG1P63261 375 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 ACSM5Q6NUN0 579 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 DGAT2L6Q6ZPD8 337 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 COX15Q7KZN9 410 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 LACC1Q8IV20 430 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 GHSRQ92847 366 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 SF3B5Q9BWJ5 86 aaKnown RBP8.31□□□□□ -1.08
PTPRE-202ENST00000306042 MMP27Q9H306 513 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 DPAGT1Q9H3H5 408 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 GNG12Q9UBI6 72 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 B9D1Q9UPM9 204 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 POLDIP2Q9Y2S7 368 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 SLC16A6O15403 523 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 PAHP00439 452 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms