RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 NECAP1Q8NC96 275 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 OR10J5Q8NHC4 309 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 KCNE3Q9Y6H6 103 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 PRKACBP22694 351 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 CCR6P51684 374 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 HNRNPFP52597 415 aaKnown RBP7.1□□□□□ -1.27
SCN9A-201ENST00000303354 TMEM215Q68D42 235 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 PWWP2BQ6NUJ5 590 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 PRSS48Q7RTY5 328 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 GORASP2Q9H8Y8 452 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 BARX1Q9HBU1 254 aaPredicted RBP7.1□□□□□ -1.27
SCN9A-201ENST00000303354 SLX4Q8IY92 1834 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 EIF3FO00303 357 aaPredicted RBP7.1□□□□□ -1.27
SCN9A-201ENST00000303354 APOA2P02652 100 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 SFTPA2Q8IWL1 248 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 CMBLQ96DG6 245 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 RTP4Q96DX8 246 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 C20orf24Q9BUV8 137 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 MBD1Q9UIS9 605 aaPredicted RBP7.1□□□□□ -1.27
SCN9A-201ENST00000303354 LOXHD1Q8IVV2 1947 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 ZNF705GA8MUZ8 300 aaPredicted RBP7.09□□□□□ -1.27
SCN9A-201ENST00000303354 ETHE1O95571 254 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 SPRED3Q2MJR0 410 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 ZFAND1Q8TCF1 268 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 DEDD2Q8WXF8 326 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 TMPRSS13Q9BYE2 586 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 PMS2P1A4D2B8 440 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 BHLHE40O14503 412 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 GFRA3O60609 400 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 HSD17B1P14061 328 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 MAP2K6P52564 334 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 GSCP56915 257 aaPredicted RBP7.09□□□□□ -1.27
SCN9A-201ENST00000303354 GK2Q14410 553 aaPredicted RBP7.09□□□□□ -1.27
SCN9A-201ENST00000303354 AFMIDQ63HM1 303 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 OR2T2Q6IF00 324 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 GRINAQ7Z429 371 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 CMTM2Q8TAZ6 248 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 PTPMT1Q8WUK0 201 aaPredicted RBP7.09□□□□□ -1.27
SCN9A-201ENST00000303354 EXO1Q9UQ84 846 aaKnown RBP7.09□□□□□ -1.27
SCN9A-201ENST00000303354 AKAP12Q02952 1782 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 H0YIV9 168 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 ANGPTL7O43827 346 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 RBP4P02753 201 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 OR3A4PP47883 348 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 UBE2MP61081 183 aaKnown RBP7.09□□□□□ -1.27
SCN9A-201ENST00000303354 EMX1Q04741 257 aaPredicted RBP7.09□□□□□ -1.27
SCN9A-201ENST00000303354 CEACAM16Q2WEN9 425 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 YIF1BQ5BJH7 314 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 DPPA2Q7Z7J5 298 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 TOPAZ1Q8N9V7 1692 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 EIF1P41567 113 aaKnown RBP7.09□□□□□ -1.27
SCN9A-201ENST00000303354 BAMBIQ13145 260 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 SPANXN5Q5MJ07 72 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 OR2T35Q8NGX2 323 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 FAM122AQ96E09 287 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 UBL7Q96S82 380 aaPredicted RBP7.09□□□□□ -1.27
SCN9A-201ENST00000303354 GAL3ST2Q9H3Q3 398 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 MOV10Q9HCE1 1003 aaKnown RBP7.09□□□□□ -1.27
SCN9A-201ENST00000303354 ACSS1Q9NUB1 689 aaPredicted RBP7.09□□□□□ -1.27
SCN9A-201ENST00000303354 NAGKQ9UJ70 344 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 GMEB1Q9Y692 573 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 CT45A6P0DMU7 189 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 CT45A5P0DMU8 189 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 CT45A7P0DMV0 189 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 CT45A8P0DMV1 189 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 CT45A9P0DMV2 189 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 RAB1AP62820 205 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 PRDX4Q13162 271 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 VEZF1Q14119 521 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 CT45A2Q5DJT8 189 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 CT45A1Q5HYN5 189 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 FAM69AQ5T7M9 428 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 ZNF626Q68DY1 528 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 ENTHD1Q8IYW4 607 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 OR6M1Q8NGM8 313 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 CT45A3Q8NHU0 189 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 SNAPC3Q92966 411 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 TAS2R5Q9NYW4 299 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 TAAR3PQ9P1P4 343 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 ZFP92A6NM28 416 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 CTDSP2O14595 271 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 GOSR1O95249 250 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 ZNF91Q05481 1191 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 OR10K2Q6IF99 312 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 SUMF2Q8NBJ7 301 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 MISP3Q96FF7 219 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 SPIN2AQ99865 258 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 SPIN2BQ9BPZ2 258 aa7.09□□□□□ -1.27
SCN9A-201ENST00000303354 OR6C76A6NM76 312 aa7.09□□□□□ -1.28
SCN9A-201ENST00000303354 CCL21O00585 134 aa7.09□□□□□ -1.28
SCN9A-201ENST00000303354 SH2D1BO14796 132 aa7.09□□□□□ -1.28
SCN9A-201ENST00000303354 HTR2AP28223 471 aa7.09□□□□□ -1.28
SCN9A-201ENST00000303354 CAPZBP47756 277 aa7.09□□□□□ -1.28
SCN9A-201ENST00000303354 TLE1Q04724 770 aa7.09□□□□□ -1.28
SCN9A-201ENST00000303354 STUMQ69YW2 141 aa7.09□□□□□ -1.28
SCN9A-201ENST00000303354 CGB2Q6NT52 195 aa7.09□□□□□ -1.28
SCN9A-201ENST00000303354 WDSUB1Q8N9V3 476 aa7.09□□□□□ -1.28
SCN9A-201ENST00000303354 ZNF439Q8NDP4 499 aa7.09□□□□□ -1.28
SCN9A-201ENST00000303354 RFESDQ8TAC1 157 aa7.09□□□□□ -1.28
SCN9A-201ENST00000303354 ASB17Q8WXJ9 295 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms