RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 ZNF534Q76KX8 674 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 GABRG1Q8N1C3 465 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 WDR76Q9H967 626 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 FBXO4Q9UKT5 387 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 RP1P56715 2156 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 SHISA7A6NL88 538 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 CYB561P49447 251 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 ERGIC1Q969X5 290 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 KCNG2Q9UJ96 466 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 ENTPD2Q9Y5L3 495 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 ZNF91Q05481 1191 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 KHSRPQ92945 711 aaKnown RBP eCLIP13.1□□□□□ -0.31
HIPK3-201ENST00000303296 IGHEP01854 428 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 SBK2P0C263 348 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 UQCRFS1P47985 274 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 ZNF260Q3ZCT1 412 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 VWA2Q5GFL6 755 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 HENMT1Q5T8I9 393 aaKnown RBP13.1□□□□□ -0.31
HIPK3-201ENST00000303296 B3GNTL1Q67FW5 361 aaPredicted RBP13.1□□□□□ -0.31
HIPK3-201ENST00000303296 GLIPR1L1Q6UWM5 242 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 IRF2BP1Q8IU81 584 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 SEC22CQ9BRL7 303 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 WRAP73Q9P2S5 460 aaPredicted RBP13.1□□□□□ -0.31
HIPK3-201ENST00000303296 PLIN4Q96Q06 1357 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 ZNF840PA6NDX5 716 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 H7C2G1 150 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 PRDX4Q13162 271 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 BTLAQ7Z6A9 289 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 TMEM135Q86UB9 458 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 PLPP6Q8IY26 295 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 C17orf78Q8N4C9 275 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 RASD2Q96D21 266 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 CABLES2Q9BTV7 478 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 SHC1P29353 583 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 ZNF154Q13106 437 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 NPY5RQ15761 445 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 PKMYT1Q99640 499 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 CTSFQ9UBX1 484 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 EVPLQ92817 2033 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 A0A1W2PPQ1 181 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 HSBP1O75506 76 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 LAX1Q8IWV1 398 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 OR2AK2Q8NG84 335 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 BTNL2Q9UIR0 455 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 MS4A18H0YCH9 400 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 ZNF195O14628 629 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 ADIPOQQ15848 244 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 MS4A18Q3C1V0 323 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 TFAP2EQ6VUC0 442 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.09□□□□□ -0.318e-9■■■■■ 28.6
HIPK3-201ENST00000303296 OR14A16Q8NHC5 309 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 NKX6-2Q9C056 277 aaPredicted RBP13.09□□□□□ -0.31
HIPK3-201ENST00000303296 USP3Q9Y6I4 520 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 GPM6AP51674 278 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 SLC17A1Q14916 467 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 RPUSD3Q6P087 351 aaKnown RBP13.09□□□□□ -0.31
HIPK3-201ENST00000303296 FBXL6Q8N531 539 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 PRSS3P2Q8NHM4 247 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 TSLPQ969D9 159 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 FUBP1Q96AE4 644 aaKnown RBP13.09□□□□□ -0.31
HIPK3-201ENST00000303296 FAXDC2Q96IV6 333 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 OR4C12Q96R67 309 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 NPY6RQ99463 290 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 RNF2Q99496 336 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 PTPRMP28827 1452 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 ZNF85Q03923 595 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 ZNF620Q6ZNG0 422 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 RBPMS2Q6ZRY4 209 aaKnown RBP13.09□□□□□ -0.31
HIPK3-201ENST00000303296 SLC17A4Q9Y2C5 497 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 CEP170BQ9Y4F5 1589 aaPredicted RBP13.09□□□□□ -0.31
HIPK3-201ENST00000303296 MEGF6O75095 1541 aa13.09□□□□□ -0.31
HIPK3-201ENST00000303296 TMED7-TICAM2A0A0A6YYA0 188 aa13.08□□□□□ -0.31
HIPK3-201ENST00000303296 IGHV3-15A0A0B4J1V0 119 aa13.08□□□□□ -0.31
HIPK3-201ENST00000303296 TO15178 435 aa13.08□□□□□ -0.31
HIPK3-201ENST00000303296 FPR3P25089 353 aa13.08□□□□□ -0.31
HIPK3-201ENST00000303296 WDR5P61964 334 aaKnown RBP13.08□□□□□ -0.31
HIPK3-201ENST00000303296 PRTGQ2VWP7 1150 aa13.08□□□□□ -0.31
HIPK3-201ENST00000303296 FAM162BQ5T6X4 162 aa13.08□□□□□ -0.31
HIPK3-201ENST00000303296 RXFP4Q8TDU9 374 aa13.08□□□□□ -0.31
HIPK3-201ENST00000303296 SLC22A12Q96S37 553 aa13.08□□□□□ -0.31
HIPK3-201ENST00000303296 EMC6Q9BV81 110 aa13.08□□□□□ -0.31
HIPK3-201ENST00000303296 RBPJLQ9UBG7 517 aa13.08□□□□□ -0.31
HIPK3-201ENST00000303296 PADI1Q9ULC6 663 aa13.08□□□□□ -0.31
HIPK3-201ENST00000303296 TMED7Q9Y3B3 224 aa13.08□□□□□ -0.31
HIPK3-201ENST00000303296 XRCC2O43543 280 aa13.08□□□□□ -0.32
HIPK3-201ENST00000303296 LYZL6O75951 148 aa13.08□□□□□ -0.32
HIPK3-201ENST00000303296 C21orf58P58505 322 aa13.08□□□□□ -0.32
HIPK3-201ENST00000303296 DEFB109BQ30KR1 87 aa13.08□□□□□ -0.32
HIPK3-201ENST00000303296 HSF5Q4G112 596 aaPredicted RBP13.08□□□□□ -0.32
HIPK3-201ENST00000303296 ZNF788Q6ZQV5 615 aa13.08□□□□□ -0.32
HIPK3-201ENST00000303296 PDZD3Q86UT5 571 aa13.08□□□□□ -0.32
HIPK3-201ENST00000303296 MDGA1Q8NFP4 955 aa13.08□□□□□ -0.32
HIPK3-201ENST00000303296 RTP4Q96DX8 246 aa13.08□□□□□ -0.32
HIPK3-201ENST00000303296 SLC35A4Q96G79 324 aa13.08□□□□□ -0.32
HIPK3-201ENST00000303296 IQCF3P0C7M6 154 aa13.08□□□□□ -0.32
HIPK3-201ENST00000303296 CCDC190Q86UF4 302 aa13.08□□□□□ -0.32
HIPK3-201ENST00000303296 RETREG3Q86VR2 466 aa13.08□□□□□ -0.32
HIPK3-201ENST00000303296 C4orf32Q8N8J7 132 aa13.08□□□□□ -0.32
HIPK3-201ENST00000303296 DRAXINQ8NBI3 349 aaPredicted RBP13.08□□□□□ -0.32
HIPK3-201ENST00000303296 NUP37Q8NFH4 326 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms