RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 NR0B2Q15466 257 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 ZNF385CQ66K41 422 aaPredicted RBP10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 KLHDC8AQ8IYD2 350 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 TP53I13Q8NBR0 393 aaPredicted RBP10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 FBXO22Q8NEZ5 403 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 PEX11GQ96HA9 241 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 C1QTNF6Q9BXI9 259 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 SLC35B3Q9H1N7 401 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 BANF2Q9H503 90 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 LANCL2Q9NS86 450 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 GNG12Q9UBI6 72 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 CT45A6P0DMU7 189 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 CT45A5P0DMU8 189 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 CT45A7P0DMV0 189 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 CT45A8P0DMV1 189 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 CT45A9P0DMV2 189 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 PSMB2P49721 201 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 RPS15AP62244 130 aaKnown RBP10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 CT45A2Q5DJT8 189 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 CT45A1Q5HYN5 189 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 BATF2Q8N1L9 274 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 CT45A3Q8NHU0 189 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 WFIKKN2Q8TEU8 576 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 PIGCQ92535 297 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 ZC3H12DA2A288 527 aaKnown RBP10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 MPC1LP0DKB6 136 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 POU3F3P20264 500 aaPredicted RBP10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 SLC19A1P41440 591 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 PLP1P60201 277 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 SYPL1Q16563 259 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 SEZ6L2Q6UXD5 910 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 LINC00299Q6ZSB3 139 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 CD200R1Q8TD46 325 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 ASB11Q8WXH4 323 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 RBM14Q96PK6 669 aaKnown RBP10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 VN1R3Q9BXE9 311 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 TMEM9BQ9NQ34 198 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 HEYLQ9NQ87 328 aaPredicted RBP10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 HSFX1Q9UBD0 423 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 GTF3C1Q12789 2109 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 TARBP1Q13395 1621 aaKnown RBP10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 IL1RNP18510 177 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 KCNG3Q8TAE7 436 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 TNFP01375 233 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 CERS5Q8N5B7 392 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 NMNAT3Q96T66 252 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 KCNJ15Q99712 375 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 DNAJB11Q9UBS4 358 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 A0A0U1RQS6 177 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 FITM1A5D6W6 292 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 ELOCQ15369 112 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 TEAD2Q15562 447 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 OR51H1Q8NH63 302 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 FREM3P0C091 2139 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 DIP2BQ9P265 1576 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 NOVA1P51513 510 aaKnown RBP10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 DHODHQ02127 395 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 CYHR1Q6ZMK1 362 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 Q6ZVL8 140 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 OR4C16Q8NGL9 310 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 STARD4Q96DR4 205 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 SMOQ99835 787 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 ADARB2Q9NS39 739 aaKnown RBP10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 KIF13BQ9NQT8 1826 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 ANKRD30BLA7E2S9 258 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 MAN2B1O00754 1011 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 RNF224P0DH78 156 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 NKX2-1P43699 371 aaPredicted RBP10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 PCBP3P57721 371 aaKnown RBP10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 OR10C1Q96KK4 312 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 PLA2G12AQ9BZM1 189 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 NKX2-4Q9H2Z4 354 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 PTPRZ1P23471 2315 aaPredicted RBP10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 PEX10O60683 326 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 ADAM11O75078 769 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 ATP1B3P54709 279 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 GBX1Q14549 363 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 PET117Q6UWS5 81 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 TAS2R4Q9NYW5 299 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 FAM166BA8MTA8 275 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 PYCARD-AS1I3L0S3 204 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 GFRA2O00451 464 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 LEFTY1O75610 366 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 OR2T7P0C7T2 308 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 CD99P14209 185 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 CHRNA7P36544 502 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 JAG1P78504 1218 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 FABP5Q01469 135 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 SYT14P1Q58G82 188 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 KMT5CQ86Y97 462 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 TRAPPC2LQ9UL33 140 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 BVESQ8NE79 360 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 MS4A3Q96HJ5 214 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 MYLKQ15746 1914 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 SDCBPO00560 298 aaPredicted RBP10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 ST8SIA3O43173 380 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 F13BP05160 661 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 GSK3AP49840 483 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms