RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 WACQ9BTA9 647 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 CENPMQ9NSP4 180 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 CYB5R1Q9UHQ9 305 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 MRPS18CQ9Y3D5 142 aaKnown RBP8.53□□□□□ -1.04
TRIM55-201ENST00000276573 MRPS18BQ9Y676 258 aaKnown RBP8.53□□□□□ -1.04
TRIM55-201ENST00000276573 R4GMQ9 66 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 TRAV8-7A0A075B6U6 113 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 SLC43A1O75387 559 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 VAMP5O95183 116 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 QDPRP09417 244 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 H2BFMP0C1H6 154 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 CD96P40200 585 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 AGFG1P52594 562 aaKnown RBP8.53□□□□□ -1.04
TRIM55-201ENST00000276573 NUBP1P53384 320 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 CLDN17P56750 224 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 OC90Q02509 493 aaPredicted RBP8.53□□□□□ -1.04
TRIM55-201ENST00000276573 CORO6Q6QEF8 472 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 CREB3L2Q70SY1 520 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 GLRX5Q86SX6 157 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 YRDCQ86U90 279 aaKnown RBP8.53□□□□□ -1.04
TRIM55-201ENST00000276573 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.53□□□□□ -1.04
TRIM55-201ENST00000276573 CMTM4Q8IZR5 234 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 LGALS14Q8TCE9 139 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 CHAC2Q8WUX2 184 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 RNF133Q8WVZ7 376 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 THAP7Q9BT49 309 aaPredicted RBP8.53□□□□□ -1.04
TRIM55-201ENST00000276573 MRI1Q9BV20 369 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 B3GNT4Q9C0J1 378 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 SEC61A2Q9H9S3 476 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 DEPPQ9NTK1 212 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 FBXL3Q9UKT7 428 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 CLEC4AQ9UMR7 237 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 GTF2A1LQ9UNN4 478 aa8.53□□□□□ -1.04
TRIM55-201ENST00000276573 A0A1W2PPL8 197 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 LRRC3CA6NJW4 275 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 GJE1A6NN92 205 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 H3BSH0 61 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 LANCL1O43813 399 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 RFPL3SP0C7P2 107 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 CALCBP10092 127 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 NR4A2P43354 598 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 KIR2DL3P43628 341 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 CD300CQ08708 224 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 KCNMB1Q16558 191 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 CARTPTQ16568 116 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 UBE2NLQ5JXB2 153 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 MZT2BQ6NZ67 158 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 UBE2J2Q8N2K1 259 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 OR14L1PQ8NHC6 308 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 TSEN15Q8WW01 171 aaKnown RBP8.52□□□□□ -1.05
TRIM55-201ENST00000276573 KCNE4Q8WWG9 221 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 SLAMF6Q96DU3 332 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 UCN2Q96RP3 112 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 HDHD2Q9H0R4 259 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 C1orf198Q9H425 327 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 PARD6AQ9NPB6 346 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 G6PC2Q9NQR9 355 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 OR52A1Q9UKL2 312 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 CAMK2AQ9UQM7 478 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 EMC9Q9Y3B6 208 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 FREM3P0C091 2139 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 IGHV3-15A0A0B4J1V0 119 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 TMEM269A0A1B0GVZ9 245 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 TNFSF11O14788 317 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 UBL3O95164 117 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 MAS1P04201 325 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 ISG15P05161 165 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 PRKAR1AP10644 381 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 DCTDP32321 178 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 MAP2K3P46734 347 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 INPP1P49441 399 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 RAC3P60763 192 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 PITPNAQ00169 270 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 POU4F3Q15319 338 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 DCAF10Q5QP82 559 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 ABHD17BQ5VST6 288 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 ZNF57Q68EA5 555 aaPredicted RBP8.52□□□□□ -1.05
TRIM55-201ENST00000276573 SPINK14Q6IE38 97 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 BAIAP2L2Q6UXY1 529 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 FCRLAQ7L513 359 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 UBQLNLQ8IYU4 475 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 DUSP18Q8NEJ0 188 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 OR10S1Q8NGN2 331 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 ASB5Q8WWX0 329 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 HPS1Q92902 700 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 RFT1Q96AA3 541 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 ZC3HAV1LQ96H79 300 aaKnown RBP8.52□□□□□ -1.05
TRIM55-201ENST00000276573 MMP28Q9H239 520 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 EMC7Q9NPA0 242 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 ZFP64Q9NPA5 681 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 LRFN1Q9P244 771 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 OR5V1Q9UGF6 321 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 IL17BQ9UHF5 180 aa8.52□□□□□ -1.05
TRIM55-201ENST00000276573 PINLYPA6NC86 204 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 ANXA2P2A6NMY6 339 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 NPIPA2E9PIF3 369 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 NPIPA3F8WFD2 350 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 H0YC42 278 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 STMND1H3BQB6 276 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 EIF1AYO14602 144 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms