RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 SPINT2O43291 252 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 SPI1P17947 270 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 GABRA4P48169 554 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 RPL11P62913 178 aaKnown RBP10.47□□□□□ -0.73
USP53-201ENST00000274030 ACVR1Q04771 509 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 TRILQ7L0X0 811 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 NKAIN3Q8N8D7 197 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 SLAMF6Q96DU3 332 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 CHST11Q9NPF2 352 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 EXO1Q9UQ84 846 aaKnown RBP10.47□□□□□ -0.73
USP53-201ENST00000274030 PRELID3BQ9Y3B1 194 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 SDCBPO00560 298 aaPredicted RBP10.47□□□□□ -0.73
USP53-201ENST00000274030 ALOX5APP20292 161 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 METAP1P53582 386 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 UBE2MP61081 183 aaKnown RBP10.47□□□□□ -0.73
USP53-201ENST00000274030 LPCAT3Q6P1A2 487 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 KCNIP4Q6PIL6 250 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 SSX9Q7RTT3 188 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 TMPRSS7Q7RTY8 843 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 PLPP6Q8IY26 295 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 KIRREL1Q96J84 757 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 PTDSS2Q9BVG9 487 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 OR52A5Q9H2C5 316 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 PATZ1Q9HBE1 687 aaKnown RBP10.47□□□□□ -0.73
USP53-201ENST00000274030 EVPLQ92817 2033 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 LOXHD1Q8IVV2 1947 aa10.47□□□□□ -0.73
USP53-201ENST00000274030 ZFP92A6NM28 416 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 H0Y8G0 127 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 OR2J2O76002 312 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 CLEC3BP05452 202 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 CCR9P51686 369 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 ELLP55199 621 aaPredicted RBP10.46□□□□□ -0.73
USP53-201ENST00000274030 ZNF92Q03936 586 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 ANKRD16Q6P6B7 361 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 ZNF620Q6ZNG0 422 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 RDH5Q92781 318 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 ARV1Q9H2C2 271 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 RPL18Q07020 188 aaKnown RBP10.46□□□□□ -0.73
USP53-201ENST00000274030 MRPL58Q14197 206 aaKnown RBP10.46□□□□□ -0.73
USP53-201ENST00000274030 USP51Q70EK9 711 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 OR51F2Q8NH61 342 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 GPR119Q8TDV5 335 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 UHRF2Q96PU4 802 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 TMEM235A6NFC5 223 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 PPM1DO15297 605 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 YKT6O15498 198 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 HRO43593 1189 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 GPX5O75715 221 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 CNIH1O95406 144 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 IGLV3-25P01717 112 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 PI3P19957 117 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 SLC35A2P78381 396 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 TLE4Q04727 773 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 CD300LGQ6UXG3 332 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 DPPA2Q7Z7J5 298 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 ZNF439Q8NDP4 499 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 C20orf24Q9BUV8 137 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 PTTG3PQ9NZH4 202 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 B3GAT1Q9P2W7 334 aa10.46□□□□□ -0.73
USP53-201ENST00000274030 E9PI62 339 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 UPK1AO00322 258 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 FAM157BP0CG42 384 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 TBXA2RP21731 343 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 AADACP22760 399 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 OPRM1P35372 400 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 OR10A3P58181 314 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 DGCR2P98153 550 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 C9orf50Q5SZB4 431 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 CYHR1Q6ZMK1 362 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 CA13Q8N1Q1 262 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 OR1N1Q8NGS0 311 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 SLC22A11Q9NSA0 550 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 AGAP14A8MT82 685 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 SCGB1D1O95968 90 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 SOD1P00441 154 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 S100A11P31949 105 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 GP2P55259 537 aaKnown RBP10.46□□□□□ -0.74
USP53-201ENST00000274030 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.46□□□□□ -0.74
USP53-201ENST00000274030 TMEM196Q5HYL7 178 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 SOHLH1Q5JUK2 328 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 OR51A4Q8NGJ6 313 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 SLCO4A1Q96BD0 722 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 INTS12Q96CB8 462 aaKnown RBP10.46□□□□□ -0.74
USP53-201ENST00000274030 DDOQ99489 341 aa10.46□□□□□ -0.74
USP53-201ENST00000274030 NUP205Q92621 2012 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 C5orf49A4QMS7 147 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 CXCL13O43927 109 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 WNT11O96014 354 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 IGLV3-27P01718 113 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 CNR1P21554 472 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 RAB11AP62491 216 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 OR8G1Q15617 311 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 OR10K2Q6IF99 312 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 TCTN3Q6NUS6 607 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 NLRP8Q86W28 1048 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 OR10J5Q8NHC4 309 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 SLC25A43Q8WUT9 341 aaPredicted RBP10.45□□□□□ -0.74
USP53-201ENST00000274030 SLC25A46Q96AG3 418 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 LYSMD1Q96S90 227 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 SLC22A13Q9Y226 551 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms