RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 PRKYO43930 277 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 HLA-DQA2P01906 255 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 PAX7P23759 505 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 TEKQ02763 1124 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 HSF2Q03933 536 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 C3orf36Q3SXR2 165 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 SLC22A25Q6T423 547 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 B3GLCTQ6Y288 498 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 DPPA2Q7Z7J5 298 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 ZNF511Q8NB15 262 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 CPEB3Q8NE35 698 aaKnown RBP11.07□□□□□ -0.64
SS18-202ENST00000269138 AKAP1Q92667 903 aaKnown RBP eCLIP11.07□□□□□ -0.64
SS18-202ENST00000269138 PLEKHA8Q96JA3 519 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 RADILQ96JH8 1075 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 LURAP1Q96LR2 239 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 MBOAT4Q96T53 435 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 OR2H1Q9GZK4 316 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 OR51V1Q9H2C8 321 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 TOR3AQ9H497 397 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 UBTD1Q9HAC8 227 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 ROS1P08922 2347 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 APCP25054 2843 aa11.07□□□□□ -0.64
SS18-202ENST00000269138 ITPR2Q14571 2701 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 IGHV2OR16-5A0A0B4J2B6 119 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 PRR23D1E9PI22 279 aaPredicted RBP11.06□□□□□ -0.64
SS18-202ENST00000269138 SNAP29O95721 258 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 SERPINA5P05154 406 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 PRR23D2P0DMB1 279 aaPredicted RBP11.06□□□□□ -0.64
SS18-202ENST00000269138 PSKH1P11801 424 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 CCL2P13500 99 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 APEX1P27695 318 aaKnown RBP11.06□□□□□ -0.64
SS18-202ENST00000269138 PEX2P28328 305 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 LSM6P62312 80 aaKnown RBP11.06□□□□□ -0.64
SS18-202ENST00000269138 EFNB1P98172 346 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 HGFACQ04756 655 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 GLO1Q04760 184 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 LINC01590Q5TEZ4 76 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 ZNF774Q6NX45 483 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 CORO6Q6QEF8 472 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 BCDIN3DQ7Z5W3 292 aaKnown RBP11.06□□□□□ -0.64
SS18-202ENST00000269138 GALNT4Q8N4A0 578 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 PAQR4Q8N4S7 273 aaPredicted RBP11.06□□□□□ -0.64
SS18-202ENST00000269138 TCEANCQ8N8B7 351 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 IL4I1Q96RQ9 567 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 TEX12Q9BXU0 123 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 GRIP2Q9C0E4 1043 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 DCLRE1BQ9H816 532 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 WDR76Q9H967 626 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 MOV10Q9HCE1 1003 aaKnown RBP11.06□□□□□ -0.64
SS18-202ENST00000269138 ASH2LQ9UBL3 628 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 ENOPH1Q9UHY7 261 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 TIMM10BQ9Y5J6 103 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 ORC6Q9Y5N6 252 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 LHFPL6Q9Y693 200 aa11.06□□□□□ -0.64
SS18-202ENST00000269138 E7EQL1 145 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 E9PQ18 207 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 DLGAP1O14490 977 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 TLX2O43763 284 aaPredicted RBP11.05□□□□□ -0.64
SS18-202ENST00000269138 CRYAAP02489 173 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 PAICSP22234 425 aaKnown RBP11.05□□□□□ -0.64
SS18-202ENST00000269138 GGT2P36268 569 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 RPS27P42677 84 aaKnown RBP11.05□□□□□ -0.64
SS18-202ENST00000269138 RAD23AP54725 363 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 CDH11P55287 796 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 PCBD1P61457 104 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 ZNF672Q499Z4 452 aaPredicted RBP11.05□□□□□ -0.64
SS18-202ENST00000269138 CXXC5Q7LFL8 322 aaKnown RBP11.05□□□□□ -0.64
SS18-202ENST00000269138 SYT9Q86SS6 491 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 LINC00346Q8IVM7 164 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 SLC30A7Q8NEW0 376 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 OR6K6Q8NGW6 343 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 UBE2FQ969M7 185 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 POLR1DQ9Y2S0 133 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 ATP23Q9Y6H3 246 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 TACC2O95359 2948 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 AKAP6Q13023 2319 aa11.05□□□□□ -0.64
SS18-202ENST00000269138 POLQO75417 2590 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 LOC100509620A0A075B734 347 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 HS3ST1O14792 307 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 RER1O15258 196 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 ZNF35P13682 527 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 SLC2A5P22732 501 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 FMO3P31513 532 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 PLP2Q04941 152 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 AQP6Q13520 282 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 KLHL12Q53G59 568 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 CCDC92Q53HC0 331 aaPredicted RBP11.04□□□□□ -0.64
SS18-202ENST00000269138 OR10H5Q8NGA6 315 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 TMEM163Q8TC26 289 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 ZMYND19Q96E35 227 aaPredicted RBP11.04□□□□□ -0.64
SS18-202ENST00000269138 KCNS3Q9BQ31 491 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 CISD1Q9NZ45 108 aaKnown RBP11.04□□□□□ -0.64
SS18-202ENST00000269138 POU2F3Q9UKI9 436 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 FBXL3Q9UKT7 428 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 COMMD3-BMI1R4GMX3 469 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 SPG11Q96JI7 2443 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 IQCMA0A1B0GVH7 501 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 CCDC182A6NF36 153 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 H0YHG0 523 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 CASQ2O14958 399 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms