RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 BPIFB2Q8N4F0 458 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 CLEC1AQ8NC01 280 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 BVESQ8NE79 360 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 OTOSQ8NHW6 89 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 ROBO4Q8WZ75 1007 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 POLE3Q9NRF9 147 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 KIF25Q9UIL4 384 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 TMED7Q9Y3B3 224 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 RNF215Q9Y6U7 377 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 ASPMQ8IZT6 3477 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 CLPSP04118 112 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 DCNP07585 359 aaKnown RBP15.11■□□□□ 0.01
SQLE-201ENST00000265896 FZD2Q14332 565 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 DEFB133Q30KQ1 61 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 TMEM225Q6GV28 225 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 TMPRSS9Q7Z410 1059 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 OR52H1Q8NGJ2 320 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 ABHD6Q9BV23 337 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 TMEM231Q9H6L2 316 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 VDAC3Q9Y277 283 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 IGKV1D-43A0A0B4J1Z2 117 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 SNRPGP15A8MWD9 76 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 IGHV4-34P06331 123 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 STARP49675 285 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 SLC17A1Q14916 467 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 UBXN2BQ14CS0 331 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 EEF1A1P5Q5VTE0 462 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 TMPPEQ6ZT21 453 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 C12orf45Q8N5I9 185 aaPredicted RBP15.11■□□□□ 0.01
SQLE-201ENST00000265896 OR4D6Q8NGJ1 314 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 OR6N1Q8NGY5 312 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 LRP12Q9Y561 859 aa15.11■□□□□ 0.01
SQLE-201ENST00000265896 TMEM212A6NML5 194 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 SULT1B1O43704 296 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 CSF1P09603 554 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 DNASE1L1P49184 302 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 CXADRP78310 365 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 DHRS2Q13268 280 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 IL10RAQ13651 578 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 OR13C3Q8NGS6 347 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 ASB5Q8WWX0 329 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 MCHR2Q969V1 340 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 MRPS24Q96EL2 167 aaKnown RBP15.1■□□□□ 0.01
SQLE-201ENST00000265896 SOX7Q9BT81 388 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 FOXQ1Q9C009 403 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 SHARPINQ9H0F6 387 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 KLK13Q9UKR3 277 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 LOC100289279A0A1B0GTE1 492 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 OR5H14A6NHG9 310 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 H3BML4 177 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 CSRP1P21291 193 aaKnown RBP15.1■□□□□ 0.01
SQLE-201ENST00000265896 HTR2CP28335 458 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 ATPAF1Q5TC12 328 aaPredicted RBP15.1■□□□□ 0.01
SQLE-201ENST00000265896 ZNF595Q8IYB9 648 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 OR2I1PQ8NGU4 316 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 GPBAR1Q8TDU6 330 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 MARVELD3Q96A59 401 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 ZNF587Q96SQ5 575 aaPredicted RBP15.1■□□□□ 0.01
SQLE-201ENST00000265896 SLC38A3Q99624 504 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 TBL1XR1Q9BZK7 514 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 NKX2-4Q9H2Z4 354 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 PTGES2Q9H7Z7 377 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 GMEB2Q9UKD1 530 aa15.1■□□□□ 0.01
SQLE-201ENST00000265896 TRBV5-7A0A0A0MS05 114 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 CYB5AP00167 134 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 IL5P05113 134 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 IL12BP29460 328 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 TNFRSF4P43489 277 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 SLC37A1P57057 533 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 GMFBP60983 142 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 ZNF273Q14593 569 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 CDH26Q8IXH8 852 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 TMEM185AQ8NFB2 350 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 LRRC46Q96FV0 321 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 LRRC61Q9BV99 259 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 SAV1Q9H4B6 383 aaPredicted RBP15.09■□□□□ 0.01
SQLE-201ENST00000265896 ZNF736B4DX44 427 aaPredicted RBP15.09■□□□□ 0.01
SQLE-201ENST00000265896 GNB3P16520 340 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 C4BPBP20851 252 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 CAPZA2P47755 286 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 FUT7Q11130 342 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 SHHQ15465 462 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 LMX1AQ8TE12 382 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 PPP1R1CQ8WVI7 109 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 VRK1Q99986 396 aaPredicted RBP15.09■□□□□ 0.01
SQLE-201ENST00000265896 NUDT9Q9BW91 350 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 ETV7Q9Y603 341 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 PNMTP11086 282 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 ANOS1P23352 680 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 PRTGQ2VWP7 1150 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 LANCL3Q6ZV70 420 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 DCXRQ7Z4W1 244 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 ADAD2Q8NCV1 583 aaKnown RBP15.09■□□□□ 0.01
SQLE-201ENST00000265896 BHLHE23Q8NDY6 225 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 LHFPL5Q8TAF8 219 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 SLC41A2Q96JW4 573 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 ARL5BQ96KC2 179 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 OR8B4Q96RC9 309 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 EPHA6Q9UF33 1036 aa15.09■□□□□ 0.01
SQLE-201ENST00000265896 FAM186AA6NE01 2351 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms