RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 CD160O95971 181 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 ARG1P05089 322 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 RPL12P30050 165 aaKnown RBP13.75□□□□□ -0.21
CASC3-201ENST00000264645 RIN1Q13671 783 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 DOC2BQ14184 412 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 ELAVL1Q15717 326 aaKnown RBP13.75□□□□□ -0.21
CASC3-201ENST00000264645 HAGHQ16775 308 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 SLC25A30Q5SVS4 291 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 IL34Q6ZMJ4 242 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 BANF2Q9H503 90 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 PLSCR5A0PG75 271 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 F5H5K5 113 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 GP1BAP07359 652 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 BLVRBP30043 206 aaPredicted RBP13.75□□□□□ -0.21
CASC3-201ENST00000264645 SLC7A9P82251 487 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 MRPS34P82930 218 aaKnown RBP13.75□□□□□ -0.21
CASC3-201ENST00000264645 TLE3Q04726 772 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 PPP1R1AQ13522 171 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 ARL6IP1Q15041 203 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 MALSU1Q96EH3 234 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 NMNAT2Q9BZQ4 307 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 TAF1LQ8IZX4 1826 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 hCG_1809904A0A1W2PP81 198 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 A0A1W2PR64 198 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 A0A1W2PRV1 198 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 GSTZ1O43708 216 aaPredicted RBP13.75□□□□□ -0.21
CASC3-201ENST00000264645 CX3CR1P49238 355 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 C21orf58P58505 322 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 HNF4GQ14541 408 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 MPPED2Q15777 294 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 ARHGAP11BQ3KRB8 267 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 OR9A4Q8NGU2 314 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 PHYHIPLQ96FC7 376 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 HIST1H2AAQ96QV6 131 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 WFDC6Q9BQY6 131 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 CHST6Q9GZX3 395 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 SIRT3Q9NTG7 399 aaPredicted RBP13.75□□□□□ -0.21
CASC3-201ENST00000264645 GHRLQ9UBU3 117 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 GAB2Q9UQC2 676 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 PIKFYVEQ9Y2I7 2098 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 HIDE1A8MVS5 230 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 ZNF93P35789 620 aaPredicted RBP13.75□□□□□ -0.21
CASC3-201ENST00000264645 TMEM184AQ6ZMB5 413 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 TMEM217Q8N7C4 229 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 SUMF1Q8NBK3 374 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 ARHGDIGQ99819 225 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 SLC17A9Q9BYT1 436 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 RASL12Q9NYN1 266 aa13.75□□□□□ -0.21
CASC3-201ENST00000264645 IGLV3-16A0A075B6K0 115 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 SERTM1A2A2V5 107 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 SERINC4A6NH21 518 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 CST6Q15828 149 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 C19orf48Q6RUI8 117 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 TMEM182Q6ZP80 229 aaPredicted RBP13.74□□□□□ -0.21
CASC3-201ENST00000264645 MFSD9Q8NBP5 474 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 ASB13Q8WXK3 278 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 MRPS24Q96EL2 167 aaKnown RBP13.74□□□□□ -0.21
CASC3-201ENST00000264645 TOE1Q96GM8 510 aaKnown RBP13.74□□□□□ -0.21
CASC3-201ENST00000264645 CMTM3Q96MX0 182 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 SHARPINQ9H0F6 387 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 SAGE1Q9NXZ1 904 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 MRPS28Q9Y2Q9 187 aaKnown RBP13.74□□□□□ -0.21
CASC3-201ENST00000264645 RPL23AP62750 156 aaKnown RBP13.74□□□□□ -0.21
CASC3-201ENST00000264645 ZNF85Q03923 595 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 CPEB2Q7Z5Q1 589 aaKnown RBP13.74□□□□□ -0.21
CASC3-201ENST00000264645 TSEN54Q7Z6J9 526 aaKnown RBP13.74□□□□□ -0.21
CASC3-201ENST00000264645 SECTM1Q8WVN6 248 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 ARRDC3Q96B67 414 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 RAB39BQ96DA2 213 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 NXF5Q9H1B4 397 aaKnown RBP13.74□□□□□ -0.21
CASC3-201ENST00000264645 MRPL22Q9NWU5 206 aaKnown RBP13.74□□□□□ -0.21
CASC3-201ENST00000264645 A6NLC8 198 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 ZNF724A8MTY0 619 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 FKTNO75072 461 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 CYBAP13498 195 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 TAS2R46P59540 309 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 C21orf62-AS1Q17RA5 79 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 OR2T2Q6IF00 324 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 RPUSD3Q6P087 351 aaKnown RBP13.74□□□□□ -0.21
CASC3-201ENST00000264645 CD200R1LQ6Q8B3 271 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 LILRB2Q8N423 598 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 SPIN2AQ99865 258 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 SPIN2BQ9BPZ2 258 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 DUSP22Q9NRW4 184 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 FAM86C1Q9NVL1 165 aa13.74□□□□□ -0.21
CASC3-201ENST00000264645 ZNF230Q9UIE0 474 aaPredicted RBP13.74□□□□□ -0.21
CASC3-201ENST00000264645 H0YGG7 62 aa13.73□□□□□ -0.21
CASC3-201ENST00000264645 CYB5BO43169 146 aa13.73□□□□□ -0.21
CASC3-201ENST00000264645 CCNOP22674 350 aa13.73□□□□□ -0.21
CASC3-201ENST00000264645 LAP3P28838 519 aa13.73□□□□□ -0.21
CASC3-201ENST00000264645 CRYBA2P53672 197 aa13.73□□□□□ -0.21
CASC3-201ENST00000264645 B2MP61769 119 aa13.73□□□□□ -0.21
CASC3-201ENST00000264645 SLC22A24Q8N4F4 322 aa13.73□□□□□ -0.21
CASC3-201ENST00000264645 LINC00469Q8N7U9 141 aa13.73□□□□□ -0.21
CASC3-201ENST00000264645 CA5BP1Q8WTZ4 195 aa13.73□□□□□ -0.21
CASC3-201ENST00000264645 KCNK15Q9H427 330 aa13.73□□□□□ -0.21
CASC3-201ENST00000264645 SLC23A2Q9UGH3 650 aa13.73□□□□□ -0.21
CASC3-201ENST00000264645 SLC7A11Q9UPY5 501 aa13.73□□□□□ -0.21
CASC3-201ENST00000264645 MIA3Q5JRA6 1907 aa13.73□□□□□ -0.21
CASC3-201ENST00000264645 RNGTTO60942 597 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms