RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 MFSD13AQ14CX5 517 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 KCTD21Q4G0X4 260 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 CDONQ4KMG0 1287 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC18B1Q6NT16 456 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 HSDL2Q6YN16 418 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 GLB1L2Q8IW92 636 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 DHRSXQ8N5I4 330 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 OR5L2Q8NGL0 311 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 OR2AJ1Q8NGZ0 328 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 ASB10Q8WXI3 467 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 VMP1Q96GC9 406 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 PDCD1LG2Q9BQ51 273 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 ERVK13-1Q9NX77 482 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 GPR160Q9UJ42 338 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 A0A0G2JPF8 293 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 FAM25AB3EWG3 89 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 FAM25CB3EWG5 89 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 FAM25GB3EWG6 89 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 HNRNPCL3B7ZW38 293 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 ARPC3O15145 178 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 FBXO24O75426 580 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 SULT1C4O75897 302 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 HLA-DQB1P01920 261 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 HNRNPCL4P0DMR1 293 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 CALCRP30988 508 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF846Q147U1 533 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC10A1Q14973 349 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF630Q2M218 657 aaPredicted RBP4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 ZBTB49Q6ZSB9 765 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 TMEM17Q86X19 198 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 C9orf106Q8NAJ2 232 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 TMEM54Q969K7 222 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 RAB39BQ96DA2 213 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 SNRNP40Q96DI7 357 aaKnown RBP4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 NAA11Q9BSU3 229 aaPredicted RBP4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 DUSP23Q9BVJ7 150 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 PTGES2Q9H7Z7 377 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 EXOSC4Q9NPD3 245 aaKnown RBP4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 WNK2Q9Y3S1 2297 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 A0A1W2PRG6 482 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 LOC110117498-PIK3R3F6TDL0 507 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 OGG1O15527 345 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF12P17014 697 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF14P17017 642 aaPredicted RBP4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 GNALP38405 381 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 MLLT3P42568 568 aaPredicted RBP4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC16A1P53985 500 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 KRTAP1-1Q07627 177 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 SPANXN2Q5MJ10 180 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 YOD1Q5VVQ6 348 aaPredicted RBP4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 PYHIN1Q6K0P9 492 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 RAB11FIP2Q7L804 512 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 PACRGLQ8N7B6 248 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 CDRT4Q8N9R6 151 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 OR4D10Q8NGI6 311 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 WDR12Q9GZL7 423 aaKnown RBP4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 MKKSQ9NPJ1 570 aaPredicted RBP4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 BAIAP2Q9UQB8 552 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 ARGFXA6NJG6 315 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 ACOT7O00154 380 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 SYNGR3O43761 229 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 NGFP01138 241 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 RAB40ALP0C0E4 278 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 CPN2P22792 545 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 DPP4P27487 766 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 PEX19P40855 299 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 ERVFRD-1P60508 538 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 PPP3R1P63098 170 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 NFATC3Q12968 1075 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 TCTE1Q5JU00 501 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 SFRP5Q5T4F7 317 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF613Q6PF04 617 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 COMMD2Q86X83 199 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF563Q8TA94 476 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 RBM4BQ9BQ04 359 aaKnown RBP4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 CXorf56Q9H5V9 222 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 NDUFB11Q9NX14 153 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 LRCH1Q9Y2L9 728 aa4.88□□□□□ -1.63
TOPBP1-201ENST00000260810 G3V2T6 193 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 CTDSP2O14595 271 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 SNPHO15079 494 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 SYNGR4O95473 234 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 CD2P06729 351 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 CEACAM1P13688 526 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 OSMP13725 252 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 CSNK2A2P19784 350 aaPredicted RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 TACR3P29371 465 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 OPRL1P41146 370 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 GRK6P43250 576 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ROM1Q03395 351 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 QPRTQ15274 297 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 KCNJ8Q15842 424 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 C3orf38Q5JPI3 329 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 SPACA3Q8IXA5 215 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 PNLDC1Q8NA58 520 aaKnown RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ACOT11Q8WXI4 607 aaPredicted RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 TMEM43Q9BTV4 400 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 NDC1Q9BTX1 674 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 PDCD10Q9BUL8 212 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 NANSQ9NR45 359 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms