RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 C17orf78Q8N4C9 275 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 FNDC9Q8TBE3 224 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 LURAP1Q96LR2 239 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 ZNF587Q96SQ5 575 aaPredicted RBP13.53□□□□□ -0.24
KCTD3-201ENST00000259154 EMC6Q9BV81 110 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 TRPM6Q9BX84 2022 aa13.53□□□□□ -0.24
KCTD3-201ENST00000259154 SEMA7AO75326 666 aa13.52□□□□□ -0.24
KCTD3-201ENST00000259154 NID1P14543 1247 aa13.52□□□□□ -0.24
KCTD3-201ENST00000259154 SFTPDP35247 375 aa13.52□□□□□ -0.24
KCTD3-201ENST00000259154 MLF1P58340 268 aa13.52□□□□□ -0.24
KCTD3-201ENST00000259154 DUSP2Q05923 314 aa13.52□□□□□ -0.24
KCTD3-201ENST00000259154 SOHLH1Q5JUK2 328 aa13.52□□□□□ -0.24
KCTD3-201ENST00000259154 PLPP6Q8IY26 295 aa13.52□□□□□ -0.24
KCTD3-201ENST00000259154 OR14A16Q8NHC5 309 aa13.52□□□□□ -0.24
KCTD3-201ENST00000259154 SFT2D1Q8WV19 159 aa13.52□□□□□ -0.24
KCTD3-201ENST00000259154 FRZBQ92765 325 aa13.52□□□□□ -0.24
KCTD3-201ENST00000259154 VWCEQ96DN2 955 aa13.52□□□□□ -0.24
KCTD3-201ENST00000259154 LDAHQ9H6V9 325 aa13.52□□□□□ -0.24
KCTD3-201ENST00000259154 SFXN1Q9H9B4 322 aa13.52□□□□□ -0.24
KCTD3-201ENST00000259154 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.52□□□□□ -0.242e-6■■■□□ 17.6
KCTD3-201ENST00000259154 COPS7AQ9UBW8 275 aa13.52□□□□□ -0.24
KCTD3-201ENST00000259154 APOBEC3BQ9UH17 382 aaKnown RBP13.52□□□□□ -0.24
KCTD3-201ENST00000259154 PCYT1BQ9Y5K3 369 aaPredicted RBP13.52□□□□□ -0.24
KCTD3-201ENST00000259154 NOTCH4Q99466 2003 aa13.52□□□□□ -0.24
KCTD3-201ENST00000259154 ZNF726A6NNF4 738 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 H0Y8X5 98 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 H0YGG7 62 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 FGF17O60258 216 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 GNB3P16520 340 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 HRH1P35367 487 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 RASGEF1BQ0VAM2 473 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 TANGO2Q6ICL3 276 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 ZNF770Q6IQ21 691 aaPredicted RBP13.52□□□□□ -0.25
KCTD3-201ENST00000259154 BEND4Q6ZU67 534 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 OR11G2Q8NGC1 345 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 CCL4L1Q8NHW4 92 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 TTC9Q92623 222 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 ZC3HAV1LQ96H79 300 aaKnown RBP13.52□□□□□ -0.25
KCTD3-201ENST00000259154 CNTNAP3Q9BZ76 1288 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 SLC2A4RGQ9NR83 387 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 ZNF705FA8MVS1 300 aaPredicted RBP13.52□□□□□ -0.25
KCTD3-201ENST00000259154 PRRT4C9JH25 899 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 RNGTTO60942 597 aaKnown RBP13.52□□□□□ -0.25
KCTD3-201ENST00000259154 NDUFB6O95139 128 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 DIRAS3O95661 229 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 ZNF705DP0CH99 300 aaPredicted RBP13.52□□□□□ -0.25
KCTD3-201ENST00000259154 ZNF705BP0CI00 300 aaPredicted RBP13.52□□□□□ -0.25
KCTD3-201ENST00000259154 MGMTP16455 207 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 ALOX5APP20292 161 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 UBE2KP61086 200 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 PLA2G7Q13093 441 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 TMEM255AQ5JRV8 349 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 SLC16A9Q7RTY1 509 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 OR51A4Q8NGJ6 313 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 ARL5BQ96KC2 179 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 KLRF1Q9NZS2 232 aa13.52□□□□□ -0.25
KCTD3-201ENST00000259154 HELZP42694 1942 aaKnown RBP13.52□□□□□ -0.25
KCTD3-201ENST00000259154 C7orf66A4D0T2 115 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 ADAP1O75689 374 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 ZNF205O95201 554 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 HERV-K104P61576 105 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 ZP2Q05996 745 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 PMPCAQ10713 525 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 DHRS2Q13268 280 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 GNMTQ14749 295 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 ALG11Q2TAA5 492 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 NR2C2APQ86WQ0 139 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 PUSL1Q8N0Z8 303 aaKnown RBP13.51□□□□□ -0.25
KCTD3-201ENST00000259154 ZFYVE21Q9BQ24 234 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 SLC17A9Q9BYT1 436 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 PITHD1Q9GZP4 211 aaPredicted RBP13.51□□□□□ -0.25
KCTD3-201ENST00000259154 WDR76Q9H967 626 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 RHOFQ9HBH0 211 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 TAF9BQ9HBM6 251 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 LRFN1Q9P244 771 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 CACNA1GO43497 2377 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 FAM221AA4D161 298 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 ARRDC5A6NEK1 342 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 PHOX2AO14813 284 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 HOXB9P17482 250 aaPredicted RBP13.51□□□□□ -0.25
KCTD3-201ENST00000259154 TACR3P29371 465 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 PRPS1P60891 318 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 RPS15AP62244 130 aaKnown RBP13.51□□□□□ -0.25
KCTD3-201ENST00000259154 IRF4Q15306 451 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 HAGHQ16775 308 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 ADIPOR2Q86V24 386 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 NRSN1Q8IZ57 195 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 GOT1L1Q8NHS2 421 aaPredicted RBP13.51□□□□□ -0.25
KCTD3-201ENST00000259154 GFOD1Q9NXC2 390 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 PRAMEF27A3QJZ7 478 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 GPR75O95800 540 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 PSMB6P28072 239 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 EMDP50402 254 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 CYCSP99999 105 aaKnown RBP13.51□□□□□ -0.25
KCTD3-201ENST00000259154 REEP5Q00765 189 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 PLEKHN1Q494U1 663 aaPredicted RBP13.51□□□□□ -0.25
KCTD3-201ENST00000259154 PHLDA2Q53GA4 152 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 PRSS41Q7RTY9 318 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 MISPQ8IVT2 679 aa13.51□□□□□ -0.25
KCTD3-201ENST00000259154 OR5M9Q8NGP3 310 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms