RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 SRPX2O60687 465 aaPredicted RBP15.22■□□□□ 0.03
SGPP1-201ENST00000247225 RAB38P57729 211 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 EXOSC6Q5RKV6 272 aaKnown RBP15.22■□□□□ 0.03
SGPP1-201ENST00000247225 PDSS1Q5T2R2 415 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 TTLL10Q6ZVT0 673 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 DCUN1D4Q92564 292 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 TSLPQ969D9 159 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 EMC6Q9BV81 110 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 TMEM106CQ9BVX2 250 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 SELENOIQ9C0D9 397 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 ZCCHC4Q9H5U6 513 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 DHCR7Q9UBM7 475 aaKnown RBP15.22■□□□□ 0.03
SGPP1-201ENST00000247225 COA3Q9Y2R0 106 aaPredicted RBP15.22■□□□□ 0.03
SGPP1-201ENST00000247225 CELSR3Q9NYQ7 3312 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 TRAV14DV4A0A0A6YYC5 116 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 LOC100289279A0A1B0GTE1 492 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 LOC101059948A0A1B0GTJ6 334 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 HTR3BO95264 441 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 FGF2P09038 288 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 BDKRB2P30411 391 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 MRPS10P82664 201 aaKnown RBP15.22■□□□□ 0.03
SGPP1-201ENST00000247225 COX15Q7KZN9 410 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 DCBLD2Q96PD2 775 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 LDAHQ9H6V9 325 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 EPHA6Q9UF33 1036 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 A0A0J9YY10 115 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 A0A1B0GW55 424 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 DUX4L2P0CJ85 424 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 DUX4L3P0CJ86 424 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 DUX4L4P0CJ87 422 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 DUX4L5P0CJ88 424 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 DUX4L6P0CJ89 424 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 DUX4L7P0CJ90 424 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 GNB3P16520 340 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 PPP1R1AQ13522 171 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 RBM39Q14498 530 aaKnown RBP15.22■□□□□ 0.03
SGPP1-201ENST00000247225 ACKR1Q16570 336 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 ATPAF1Q5TC12 328 aaPredicted RBP15.22■□□□□ 0.03
SGPP1-201ENST00000247225 GLT8D1Q68CQ7 371 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 TMEM184AQ6ZMB5 413 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 GTPBP8Q8N3Z3 284 aaPredicted RBP15.22■□□□□ 0.03
SGPP1-201ENST00000247225 SEH1LQ96EE3 360 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 C4orf45Q96LM5 186 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 TAS2R8Q9NYW2 309 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 EMC3Q9P0I2 261 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 DUX4Q9UBX2 424 aa15.22■□□□□ 0.03
SGPP1-201ENST00000247225 LINC01565O15544 149 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 PVALBP20472 110 aaPredicted RBP15.21■□□□□ 0.03
SGPP1-201ENST00000247225 S1PR1P21453 382 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 C1orf189Q5VU69 101 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 WBP2NLQ6ICG8 309 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 TMPPEQ6ZT21 453 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 TRAPPC6BQ86SZ2 158 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 FLVCR1-AS1Q8TAF5 88 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 CST11Q9H112 138 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 UPB1Q9UBR1 384 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 POLR1DQ9Y2S0 133 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 TMEM212A6NML5 194 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 ARPC3O15145 178 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 UTS2O95399 124 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 PGAM2P15259 253 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 CTLA4P16410 223 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 TAS2R19P59542 299 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 SRSF3P84103 164 aaKnown RBP15.21■□□□□ 0.03
SGPP1-201ENST00000247225 EGR4Q05215 589 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 HLA-DQA1Q5Y7H0 255 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 OR5D18Q8NGL1 313 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 FGGYQ96C11 551 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 ZNF426Q9BUY5 554 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 TBL1XR1Q9BZK7 514 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 SLC7A5P2Q9GIP4 190 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 SEC61A2Q9H9S3 476 aa15.21■□□□□ 0.03
SGPP1-201ENST00000247225 ELL3Q9HB65 397 aaPredicted RBP15.21■□□□□ 0.03
SGPP1-201ENST00000247225 K7EQS6 105 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 ZNF264O43296 627 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 PLRG1O43660 514 aaKnown RBP15.2■□□□□ 0.02
SGPP1-201ENST00000247225 HPP00738 406 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 HLA-DOBP13765 273 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 CAPZA2P47755 286 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 S100A10P60903 97 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 SLC35D3Q5M8T2 416 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 ADAD2Q8NCV1 583 aaKnown RBP15.2■□□□□ 0.02
SGPP1-201ENST00000247225 RNF166Q96A37 237 aaPredicted RBP15.2■□□□□ 0.02
SGPP1-201ENST00000247225 GPN3Q9UHW5 284 aaPredicted RBP15.2■□□□□ 0.02
SGPP1-201ENST00000247225 ETV7Q9Y603 341 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 MAP1BP46821 2468 aaKnown RBP15.2■□□□□ 0.02
SGPP1-201ENST00000247225 TMEM200CA6NKL6 621 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 RFPL4AA6NLU0 287 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 SHISA8B8ZZ34 492 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 RFPL4AL1F8VTS6 287 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 DNASE2O00115 360 aaPredicted RBP15.2■□□□□ 0.02
SGPP1-201ENST00000247225 ICOSLGO75144 302 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 ERCC1P07992 297 aaPredicted RBP15.2■□□□□ 0.02
SGPP1-201ENST00000247225 UBXN2BQ14CS0 331 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 MANEAQ5SRI9 462 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 TFAP2EQ6VUC0 442 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 VDAC3Q9Y277 283 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 H3BML4 177 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 GLI4P10075 376 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 IL12BP29460 328 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms