RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 A0A1W2PPL8 197 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 LYRM1O43325 122 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 DNPH1O43598 174 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 SRSF10O75494 262 aaKnown RBP20.72■□□□□ 0.91
MSX2-201ENST00000239243 H2BFMP0C1H6 154 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 SCAND1P57086 179 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 SPEM2Q0P670 501 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 POU4F3Q15319 338 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 KCNE4Q8WWG9 221 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 C1orf198Q9H425 327 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 LIN7BQ9HAP6 207 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 DHDHQ9UQ10 334 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 CAMK2AQ9UQM7 478 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 SLC22A13Q9Y226 551 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 ETV7Q9Y603 341 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 TERTO14746 1132 aaKnown RBP20.72■□□□□ 0.91
MSX2-201ENST00000239243 DCTDP32321 178 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 MMP15P51511 669 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 NUBP1P53384 320 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 MFGE8Q08431 387 aaPredicted RBP20.72■□□□□ 0.91
MSX2-201ENST00000239243 TOMM20Q15388 145 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 HIST3H3Q16695 136 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 AGAP6Q5VW22 663 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 SLC25A47Q6Q0C1 308 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 AKAP14Q86UN6 197 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 THOC3Q96J01 351 aaKnown RBP20.72■□□□□ 0.91
MSX2-201ENST00000239243 AGAP4Q96P64 663 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 CLEC4AQ9UMR7 237 aa20.72■□□□□ 0.91
MSX2-201ENST00000239243 WNT11O96014 354 aa20.71■□□□□ 0.91
MSX2-201ENST00000239243 ZNF704Q6ZNC4 412 aaPredicted RBP20.71■□□□□ 0.91
MSX2-201ENST00000239243 BEST3Q8N1M1 668 aa20.71■□□□□ 0.91
MSX2-201ENST00000239243 PSMF1Q92530 271 aa20.71■□□□□ 0.91
MSX2-201ENST00000239243 ABHD1Q96SE0 405 aa20.71■□□□□ 0.91
MSX2-201ENST00000239243 B3GNT4Q9C0J1 378 aa20.71■□□□□ 0.91
MSX2-201ENST00000239243 RAD1O60671 282 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 RAMP1O60894 148 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 ISG15P05161 165 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 ADRA2CP18825 462 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 UBQLNLQ8IYU4 475 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 TRIM63Q969Q1 353 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 EMC9Q9Y3B6 208 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 WDFY4Q6ZS81 3184 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 OC90Q02509 493 aaPredicted RBP20.7■□□□□ 0.9
MSX2-201ENST00000239243 PLET1Q6UQ28 207 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 RHOUQ7L0Q8 258 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 TMPRSS12Q86WS5 348 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 ZNF227Q86WZ6 799 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 SUMF1Q8NBK3 374 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 DUSP18Q8NEJ0 188 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 RAB40AQ8WXH6 277 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 SLAMF6Q96DU3 332 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 IP6K3Q96PC2 410 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 SEC61A2Q9H9S3 476 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 CENPMQ9NSP4 180 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 CKLFQ9UBR5 152 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 OR52A1Q9UKL2 312 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 HHLA2Q9UM44 414 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 POLR1DQ9Y2S0 133 aa20.7■□□□□ 0.9
MSX2-201ENST00000239243 MRPS18CQ9Y3D5 142 aaKnown RBP20.7■□□□□ 0.9
MSX2-201ENST00000239243 TRAV8-7A0A075B6U6 113 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 A0A1B0GVC2 190 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 TMEM269A0A1B0GVZ9 245 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 A6NIN4 97 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 TTLL8A6PVC2 850 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 CTDSPLO15194 276 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 MAS1P04201 325 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 ACHEP22303 614 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 CFPP27918 469 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 KIR2DL3P43628 341 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 MMP16P51512 607 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 CLDN17P56750 224 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 CARD17Q5XLA6 110 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 LRFN4Q6PJG9 635 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 KLHL24Q6TFL4 600 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 OR2AJ1Q8NGZ0 328 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 OR14L1PQ8NHC6 308 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 STMN3Q9NZ72 180 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 ABI3Q9P2A4 366 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 FBXL3Q9UKT7 428 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 FOXJ3Q9UPW0 622 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 FAM240BA0A1B0GVZ2 78 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 NPIPA2E9PIF3 369 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 NPIPA3F8WFD2 350 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 STMND1H3BQB6 276 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 TNFSF15O95150 251 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 UBCP0CG48 685 aaKnown RBP20.69■□□□□ 0.9
MSX2-201ENST00000239243 CASRP41180 1078 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 TRIP6Q15654 476 aaKnown RBP20.69■□□□□ 0.9
MSX2-201ENST00000239243 TMEM244Q5VVB8 128 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 CORO6Q6QEF8 472 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 ABCG5Q9H222 651 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 MMP28Q9H239 520 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 RNF121Q9H920 327 aa20.69■□□□□ 0.9
MSX2-201ENST00000239243 QDPRP09417 244 aa20.68■□□□□ 0.9
MSX2-201ENST00000239243 AGFG1P52594 562 aaKnown RBP20.68■□□□□ 0.9
MSX2-201ENST00000239243 KCNMB1Q16558 191 aa20.68■□□□□ 0.9
MSX2-201ENST00000239243 CREB3L2Q70SY1 520 aa20.68■□□□□ 0.9
MSX2-201ENST00000239243 FCRLAQ7L513 359 aa20.68■□□□□ 0.9
MSX2-201ENST00000239243 CMTM4Q8IZR5 234 aa20.68■□□□□ 0.9
MSX2-201ENST00000239243 UBE2J2Q8N2K1 259 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms