RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 RNF128Q8TEB7 428 aa13.98□□□□□ -0.17
DDX55-201ENST00000238146 ADAT1Q9BUB4 502 aaKnown RBP13.98□□□□□ -0.17
DDX55-201ENST00000238146 FAM60AQ9NP50 221 aa13.98□□□□□ -0.17
DDX55-201ENST00000238146 TAS2R4Q9NYW5 299 aa13.98□□□□□ -0.17
DDX55-201ENST00000238146 HLA-DQA2P01906 255 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 HOXC4P09017 264 aaPredicted RBP13.97□□□□□ -0.17
DDX55-201ENST00000238146 BTG2P78543 158 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 PMPCAQ10713 525 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 SKP2Q13309 424 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 INPP5JQ15735 1006 aaPredicted RBP13.97□□□□□ -0.17
DDX55-201ENST00000238146 OR10K2Q6IF99 312 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 PHOSPHO1Q8TCT1 267 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 WNT2BQ93097 391 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 TAAR8Q969N4 342 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 ELSPBP1Q96BH3 223 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 CST11Q9H112 138 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 OR10A5Q9H207 317 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 PRMT8Q9NR22 394 aaPredicted RBP13.97□□□□□ -0.17
DDX55-201ENST00000238146 CLDN16Q9Y5I7 305 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 A0A0A6YYC8 382 aaPredicted RBP13.97□□□□□ -0.17
DDX55-201ENST00000238146 TMEM235A6NFC5 223 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 I3L1I5 382 aaPredicted RBP13.97□□□□□ -0.17
DDX55-201ENST00000238146 MFGE8Q08431 387 aaPredicted RBP13.97□□□□□ -0.17
DDX55-201ENST00000238146 SCRN3Q0VDG4 424 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 PPP1R1AQ13522 171 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 DEFB115Q30KQ5 88 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 PRAMEF17Q5VTA0 474 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 HAGHLQ6PII5 290 aaPredicted RBP13.97□□□□□ -0.17
DDX55-201ENST00000238146 CORO6Q6QEF8 472 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 UNQ6126/PRO20091Q6UXV3 157 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 LYG2Q86SG7 212 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 CD163Q86VB7 1156 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 SLC25A42Q86VD7 318 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 DNAJA3Q96EY1 480 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 BMFQ96LC9 184 aa13.97□□□□□ -0.17
DDX55-201ENST00000238146 ZNF107Q9UII5 783 aaPredicted RBP13.97□□□□□ -0.17
DDX55-201ENST00000238146 CACNA1IQ9P0X4 2223 aa13.96□□□□□ -0.17
DDX55-201ENST00000238146 DCDC2BA2VCK2 349 aa13.96□□□□□ -0.17
DDX55-201ENST00000238146 FITM1A5D6W6 292 aa13.96□□□□□ -0.17
DDX55-201ENST00000238146 FAM25EA8MYX2 175 aa13.96□□□□□ -0.17
DDX55-201ENST00000238146 IGFBP3P17936 291 aaPredicted RBP13.96□□□□□ -0.17
DDX55-201ENST00000238146 SERTAD2Q14140 314 aa13.96□□□□□ -0.17
DDX55-201ENST00000238146 ELOCQ15369 112 aa13.96□□□□□ -0.17
DDX55-201ENST00000238146 PAPD4Q6PIY7 484 aaKnown RBP13.96□□□□□ -0.17
DDX55-201ENST00000238146 MED25Q71SY5 747 aa13.96□□□□□ -0.17
DDX55-201ENST00000238146 TAF8Q7Z7C8 310 aa13.96□□□□□ -0.17
DDX55-201ENST00000238146 CBLN2Q8IUK8 224 aa13.96□□□□□ -0.17
DDX55-201ENST00000238146 ARHGEF39Q8N4T4 335 aa13.96□□□□□ -0.17
DDX55-201ENST00000238146 OR51A2Q8NGJ7 313 aa13.96□□□□□ -0.17
DDX55-201ENST00000238146 MRGPRFQ96AM1 343 aa13.96□□□□□ -0.17
DDX55-201ENST00000238146 DGAT2Q96PD7 388 aa13.96□□□□□ -0.17
DDX55-201ENST00000238146 CMKLR1Q99788 373 aa13.96□□□□□ -0.17
DDX55-201ENST00000238146 PLA2G2FQ9BZM2 168 aa13.96□□□□□ -0.17
DDX55-201ENST00000238146 SLC7A5P2Q9GIP4 190 aa13.96□□□□□ -0.17
DDX55-201ENST00000238146 LOC100509620A0A075B734 347 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 OR2AT4A6NND4 320 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 LDLRAD4O15165 306 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 FGF16O43320 207 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 KCNAB3O43448 404 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 CD37P11049 281 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 AVPR2P30518 371 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 GDI1P31150 447 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 PRKXP51817 358 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 CXADRP78310 365 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 ZNF813Q6ZN06 617 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 RHOUQ7L0Q8 258 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 ADGRE4PQ86SQ3 457 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 ARMC10Q8N2F6 343 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 ZSCAN1Q8NBB4 408 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 OR5AP2Q8NGF4 316 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 THAP6Q8TBB0 222 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 IL23AQ9NPF7 189 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 OBP2AQ9NY56 170 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 MBD2Q9UBB5 411 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 CKLFQ9UBR5 152 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 TMED7Q9Y3B3 224 aa13.96□□□□□ -0.18
DDX55-201ENST00000238146 FADS1O60427 444 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 ACTL6AO96019 429 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 DCNP07585 359 aaKnown RBP13.95□□□□□ -0.18
DDX55-201ENST00000238146 TACR3P29371 465 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 KIR2DL1P43626 348 aaPredicted RBP13.95□□□□□ -0.18
DDX55-201ENST00000238146 CENPAP49450 140 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 IGLV3-21P80748 117 aaPredicted RBP13.95□□□□□ -0.18
DDX55-201ENST00000238146 FUT7Q11130 342 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 RAB12Q6IQ22 244 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 RAB11FIP2Q7L804 512 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 ZNF584Q8IVC4 421 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 ZNF615Q8N8J6 731 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 INO80EQ8NBZ0 244 aaPredicted RBP13.95□□□□□ -0.18
DDX55-201ENST00000238146 MITD1Q8WV92 249 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 ASB17Q8WXJ9 295 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 SLC25A44Q96H78 314 aaPredicted RBP13.95□□□□□ -0.18
DDX55-201ENST00000238146 ZNF587Q96SQ5 575 aaPredicted RBP13.95□□□□□ -0.18
DDX55-201ENST00000238146 ZNF768Q9H5H4 540 aaKnown RBP13.95□□□□□ -0.18
DDX55-201ENST00000238146 ESRP2Q9H6T0 727 aaKnown RBP13.95□□□□□ -0.18
DDX55-201ENST00000238146 B9D1Q9UPM9 204 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 FANCMQ8IYD8 2048 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 ARPC4-TTLL3A0A0A6YYG9 625 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 C9orf170A2RU37 121 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 IL2RAP01589 272 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms