RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 TEX101Q9BY14 249 aa15.14■□□□□ 0.01
CTDP1-201ENST00000075430 HAO2Q9NYQ3 351 aa15.14■□□□□ 0.01
CTDP1-201ENST00000075430 HMSDA8MTL9 139 aa15.14■□□□□ 0.01
CTDP1-201ENST00000075430 LINC01590Q5TEZ4 76 aa15.14■□□□□ 0.01
CTDP1-201ENST00000075430 ADAD2Q8NCV1 583 aaKnown RBP15.14■□□□□ 0.01
CTDP1-201ENST00000075430 SLC2A12Q8TD20 617 aa15.14■□□□□ 0.01
CTDP1-201ENST00000075430 GPR119Q8TDV5 335 aa15.14■□□□□ 0.01
CTDP1-201ENST00000075430 THAP3Q8WTV1 239 aaPredicted RBP15.14■□□□□ 0.01
CTDP1-201ENST00000075430 SCPEP1Q9HB40 452 aa15.14■□□□□ 0.01
CTDP1-201ENST00000075430 ACKR4Q9NPB9 350 aa15.14■□□□□ 0.01
CTDP1-201ENST00000075430 PLXNA2O75051 1894 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 OR4C45A6NMZ5 311 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 SIGLEC6O43699 453 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 ZNF254O75437 659 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 ADAP1O75689 374 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 SFTPBP07988 381 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 ERCC1P07992 297 aaPredicted RBP15.13■□□□□ 0.01
CTDP1-201ENST00000075430 UBBP0CG47 229 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 UBCP0CG48 685 aaKnown RBP15.13■□□□□ 0.01
CTDP1-201ENST00000075430 SLC2A1P11166 492 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 GPR143P51810 404 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 CCDC157Q569K6 752 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 ZNF585AQ6P3V2 769 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 CHRDL2Q6WN34 429 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 RBMS3Q6XE24 437 aaKnown RBP15.13■□□□□ 0.01
CTDP1-201ENST00000075430 SAMD14Q8IZD0 417 aaPredicted RBP15.13■□□□□ 0.01
CTDP1-201ENST00000075430 ZNF417Q8TAU3 575 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 SLC41A2Q96JW4 573 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 CKLFQ9UBR5 152 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 CSAG2Q9Y5P2 127 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 ACTL6AO96019 429 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 RENP00797 406 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 CRYBA1P05813 215 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 CALCBP10092 127 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 CAPZA2P47755 286 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 PPIAP62937 165 aaKnown RBP15.13■□□□□ 0.01
CTDP1-201ENST00000075430 SCRN3Q0VDG4 424 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 NKAPLQ5M9Q1 402 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 COX15Q7KZN9 410 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 TAF8Q7Z7C8 310 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 ZNF101Q8IZC7 436 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 OR6K3Q8NGY3 331 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 ISOC2Q96AB3 205 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 SFXN1Q9H9B4 322 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 RASL12Q9NYN1 266 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 FANCMQ8IYD8 2048 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 CELA2BP08218 269 aaPredicted RBP15.13■□□□□ 0.01
CTDP1-201ENST00000075430 CD14P08571 375 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 MGMTP16455 207 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 TACR3P29371 465 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 NPY4RP50391 375 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 MFGE8Q08431 387 aaPredicted RBP15.13■□□□□ 0.01
CTDP1-201ENST00000075430 TOMM34Q15785 309 aaPredicted RBP15.13■□□□□ 0.01
CTDP1-201ENST00000075430 KRBOX4Q5JUW0 171 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 MMABQ96EY8 250 aaPredicted RBP15.13■□□□□ 0.01
CTDP1-201ENST00000075430 PITHD1Q9GZP4 211 aaPredicted RBP15.13■□□□□ 0.01
CTDP1-201ENST00000075430 EMC3Q9P0I2 261 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 UPB1Q9UBR1 384 aa15.13■□□□□ 0.01
CTDP1-201ENST00000075430 SULT1B1O43704 296 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 WISP1O95388 367 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 ADH1BP00325 375 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 HOXB5P09067 269 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 GNB3P16520 340 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 ARRB1P49407 418 aaPredicted RBP15.12■□□□□ 0.01
CTDP1-201ENST00000075430 RPS27AP62979 156 aaKnown RBP15.12■□□□□ 0.01
CTDP1-201ENST00000075430 UBA52P62987 128 aaKnown RBP15.12■□□□□ 0.01
CTDP1-201ENST00000075430 FLI1Q01543 452 aaPredicted RBP15.12■□□□□ 0.01
CTDP1-201ENST00000075430 ILF3Q12906 894 aaKnown RBP eCLIP15.12■□□□□ 0.01
CTDP1-201ENST00000075430 ANKRD16Q6P6B7 361 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 UNQ9370/PRO34162Q6UXP9 181 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 MED25Q71SY5 747 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 ZNF550Q7Z398 422 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 ZNF321PQ8N8H1 164 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 SEH1LQ96EE3 360 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 OR11A1Q9GZK7 315 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 PLEKHA1Q9HB21 404 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 MRPS18BQ9Y676 258 aaKnown RBP15.12■□□□□ 0.01
CTDP1-201ENST00000075430 RNF215Q9Y6U7 377 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 GP1BAP07359 652 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 HTR2CP28335 458 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 C11orf87Q6NUJ2 197 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 ARMC6Q6NXE6 501 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 SHISA6Q6ZSJ9 500 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 SLC16A9Q7RTY1 509 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 TRAPPC6BQ86SZ2 158 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 OR5D18Q8NGL1 313 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 OR13C3Q8NGS6 347 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 C16orf52Q8NHV5 167 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 RSC1A1Q92681 617 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 ZNF524Q96C55 264 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 RSRP1Q9BUV0 290 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 CHRDQ9H2X0 955 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 GAREM1Q9H706 876 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 METTL8Q9H825 291 aaKnown RBP15.12■□□□□ 0.01
CTDP1-201ENST00000075430 P2RY10O00398 339 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 SRPX2O60687 465 aaPredicted RBP15.12■□□□□ 0.01
CTDP1-201ENST00000075430 ZNF205O95201 554 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 CD2P06729 351 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 CTSEP14091 401 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 KIR3DL2P43630 455 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms