RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 PPICP45877 212 aa12.46□□□□□ -0.41
PHGDH-233ENST00000642021 FNTBP49356 437 aa12.46□□□□□ -0.41
PHGDH-233ENST00000642021 INSM1Q01101 510 aaPredicted RBP12.46□□□□□ -0.41
PHGDH-233ENST00000642021 RAB11BQ15907 218 aa12.46□□□□□ -0.41
PHGDH-233ENST00000642021 MARCH3Q86UD3 253 aa12.46□□□□□ -0.41
PHGDH-233ENST00000642021 GPX8Q8TED1 209 aa12.46□□□□□ -0.41
PHGDH-233ENST00000642021 SLC25A28Q96A46 364 aa12.46□□□□□ -0.41
PHGDH-233ENST00000642021 SHARPINQ9H0F6 387 aa12.46□□□□□ -0.41
PHGDH-233ENST00000642021 EXO5Q9H790 373 aa12.46□□□□□ -0.41
PHGDH-233ENST00000642021 CDV3Q9UKY7 258 aaKnown RBP12.46□□□□□ -0.41
PHGDH-233ENST00000642021 LOC100289279A0A1B0GTE1 492 aa12.46□□□□□ -0.42
PHGDH-233ENST00000642021 A8MXK9 166 aa12.46□□□□□ -0.42
PHGDH-233ENST00000642021 M0QYG6 137 aa12.46□□□□□ -0.42
PHGDH-233ENST00000642021 SLC16A7O60669 478 aa12.46□□□□□ -0.42
PHGDH-233ENST00000642021 ATF4P18848 351 aaPredicted RBP12.46□□□□□ -0.42
PHGDH-233ENST00000642021 NUP62P37198 522 aaPredicted RBP12.46□□□□□ -0.42
PHGDH-233ENST00000642021 GFERP55789 205 aa12.46□□□□□ -0.42
PHGDH-233ENST00000642021 ACKR1Q16570 336 aa12.46□□□□□ -0.42
PHGDH-233ENST00000642021 GABRG1Q8N1C3 465 aa12.46□□□□□ -0.42
PHGDH-233ENST00000642021 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.46□□□□□ -0.42
PHGDH-233ENST00000642021 SEH1LQ96EE3 360 aa12.46□□□□□ -0.42
PHGDH-233ENST00000642021 GAL3ST4Q96RP7 486 aa12.46□□□□□ -0.42
PHGDH-233ENST00000642021 LRRC61Q9BV99 259 aa12.46□□□□□ -0.42
PHGDH-233ENST00000642021 TTYH1Q9H313 450 aaPredicted RBP12.46□□□□□ -0.42
PHGDH-233ENST00000642021 POFUT1Q9H488 388 aa12.46□□□□□ -0.42
PHGDH-233ENST00000642021 CLEC1BQ9P126 229 aa12.46□□□□□ -0.42
PHGDH-233ENST00000642021 CGGBP1Q9UFW8 167 aaPredicted RBP12.46□□□□□ -0.42
PHGDH-233ENST00000642021 MRPS18BQ9Y676 258 aaKnown RBP12.46□□□□□ -0.42
PHGDH-233ENST00000642021 SLC22A23A1A5C7 686 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 C10orf142B7Z368 130 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 SPARCP09486 303 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 CTLA4P16410 223 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 CFPP27918 469 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 OR1D4P47884 311 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 EFNA3P52797 238 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 TEX30Q5JUR7 227 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 LY6G6FQ5SQ64 297 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 FDX2Q6P4F2 183 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 C11orf88Q6PI97 169 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 ZNF679Q8IYX0 411 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 GALNT16Q8N428 558 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 OR51A2Q8NGJ7 313 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 OR1S1Q8NH92 325 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 ASB5Q8WWX0 329 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 TCTN2Q96GX1 697 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 MNTQ99583 582 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 TINAGL1Q9GZM7 467 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-233ENST00000642021 S1PR5Q9H228 398 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 LANCL2Q9NS86 450 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 MED9Q9NWA0 146 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 EPHA6Q9UF33 1036 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 FBXL2Q9UKC9 423 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 IGHV5-51A0A0C4DH38 117 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 SMAD9O15198 467 aaKnown RBP12.45□□□□□ -0.42
PHGDH-233ENST00000642021 CDC40O60508 579 aaKnown RBP eCLIP12.45□□□□□ -0.42
PHGDH-233ENST00000642021 SPDEFO95238 335 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 MPZL1O95297 269 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 CXCR1P25024 350 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 SKP1P63208 163 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 NR0B2Q15466 257 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 GLYATL3Q5SZD4 288 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 TMEM225Q6GV28 225 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 OR10K2Q6IF99 312 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 NDUFAF7Q7L592 441 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 RNF128Q8TEB7 428 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 METTL21AQ8WXB1 218 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 ADIPOR1Q96A54 375 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 CDCA3Q99618 268 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-233ENST00000642021 PTDSS2Q9BVG9 487 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 PCNX3Q9H6A9 2034 aa12.45□□□□□ -0.42
PHGDH-233ENST00000642021 TRAV14DV4A0A0A6YYC5 116 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 PRSS37A4D1T9 235 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 XKRYO14609 159 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 ALOX12BO75342 701 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 RLN2P04090 185 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 ITGB2P05107 769 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 MRPS21P82921 87 aaKnown RBP12.44□□□□□ -0.42
PHGDH-233ENST00000642021 BAMBIQ13145 260 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 SQSTM1Q13501 440 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 PRAMEF17Q5VTA0 474 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 RELL2Q8NC24 303 aaPredicted RBP12.44□□□□□ -0.42
PHGDH-233ENST00000642021 C8orf44Q96CB5 159 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 TOE1Q96GM8 510 aaKnown RBP12.44□□□□□ -0.42
PHGDH-233ENST00000642021 LAT2Q9GZY6 243 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 MFFQ9GZY8 342 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 TAS2R4Q9NYW5 299 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 GPR160Q9UJ42 338 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 CYP8B1Q9UNU6 501 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 DCDC2BA2VCK2 349 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 BLACEA4D250 179 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 NUDT14O95848 222 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 FGF2P09038 288 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 OR4E1P0C645 316 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 SERTAD2Q14140 314 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 GK2Q14410 553 aaPredicted RBP12.44□□□□□ -0.42
PHGDH-233ENST00000642021 MOGAT2Q3SYC2 334 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 ZNF627Q7L945 461 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 TMED4Q7Z7H5 227 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 NAXDQ8IW45 347 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 KDM8Q8N371 416 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms