RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 RASD1Q9Y272 281 aa6.8□□□□□ -1.32
PNKP-229ENST00000637897 PTGES3LE9PB15 166 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 H3BSA7 217 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 PLPP3O14495 311 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 RGS10O43665 173 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 AHCYL1O43865 530 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 CD5LO43866 347 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 FMO6PO60774 539 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 WBP4O75554 376 aaKnown RBP6.79□□□□□ -1.32
PNKP-229ENST00000637897 VAMP5O95183 116 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 OR5F1O95221 314 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 AHSA1O95433 338 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 PAX7P23759 505 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 DCKP27707 260 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 FMO3P31513 532 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 FABP6P51161 128 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 PRPS1P60891 318 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 COPZ1P61923 177 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 SLC35A2P78381 396 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 NAAAQ02083 359 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 PMS2P3Q13401 168 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 PTGES3Q15185 160 aaKnown RBP6.79□□□□□ -1.32
PNKP-229ENST00000637897 SEC23BQ15437 767 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 ADIPOQQ15848 244 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 FAM69AQ5T7M9 428 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 AGAP6Q5VW22 663 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 ZNF544Q6NX49 715 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 C1orf94Q6P1W5 598 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 PGBD2Q6P3X8 592 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 PODNL1Q6PEZ8 512 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 H1FNTQ75WM6 255 aaPredicted RBP6.79□□□□□ -1.32
PNKP-229ENST00000637897 RRM2BQ7LG56 351 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 PRSS48Q7RTY5 328 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 SLC46A3Q7Z3Q1 461 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 ERI1Q8IV48 349 aaKnown RBP6.79□□□□□ -1.32
PNKP-229ENST00000637897 C20orf196Q8IYI0 205 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 ZCCHC24Q8N2G6 241 aaKnown RBP6.79□□□□□ -1.32
PNKP-229ENST00000637897 LRRC17Q8N6Y2 441 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 ZNF540Q8NDQ6 660 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 ADPRHL1Q8NDY3 354 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 OR4K5Q8NGD3 323 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 OR13F1Q8NGS4 319 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 GNPDA2Q8TDQ7 276 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 C10orf105Q8TEF2 133 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 TRUB1Q8WWH5 349 aaKnown RBP6.79□□□□□ -1.32
PNKP-229ENST00000637897 FCGR1BQ92637 280 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 MYDGFQ969H8 173 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 TMIGD2Q96BF3 282 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 NMD3Q96D46 503 aaKnown RBP6.79□□□□□ -1.32
PNKP-229ENST00000637897 TRMT61AQ96FX7 289 aaKnown RBP6.79□□□□□ -1.32
PNKP-229ENST00000637897 RADILQ96JH8 1075 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 SLC38A2Q96QD8 506 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 MCHR1Q99705 422 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 KRCC1Q9NPI7 259 aaPredicted RBP6.79□□□□□ -1.32
PNKP-229ENST00000637897 MEPEQ9NQ76 525 aaPredicted RBP6.79□□□□□ -1.32
PNKP-229ENST00000637897 MAN2C1Q9NTJ4 1040 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 CLN6Q9NWW5 311 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 TAS2R5Q9NYW4 299 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 REV1Q9UBZ9 1251 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 RCE1Q9Y256 329 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 AMDHD2Q9Y303 409 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 ATP23Q9Y6H3 246 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.79□□□□□ -1.325e-6■□□□□ 9.7
PNKP-229ENST00000637897 STAB1Q9NY15 2570 aa6.79□□□□□ -1.32
PNKP-229ENST00000637897 TRAV36DV7A0A075B6V5 113 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 IGHV2OR16-5A0A0B4J2B6 119 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 SLC35F4A4IF30 521 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 FAM171A2A8MVW0 826 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 ZNF587BE7ETH6 402 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 XPNPEP2O43895 674 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 HTR1AP08908 422 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 APOBEC3AP31941 199 aaPredicted RBP6.78□□□□□ -1.32
PNKP-229ENST00000637897 TMBIM6P55061 237 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 SNRPGP62308 76 aaKnown RBP6.78□□□□□ -1.32
PNKP-229ENST00000637897 RUNX1T1Q06455 604 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 ETFDHQ16134 617 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 CEACAM16Q2WEN9 425 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 ENTPD8Q5MY95 495 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 SLX4IPQ5VYV7 408 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 XAF1Q6GPH4 301 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 ULK3Q6PHR2 472 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 LRFN4Q6PJG9 635 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 ZNF730Q6ZMV8 503 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 PTCHD4Q6ZW05 846 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 ZNF627Q7L945 461 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 SSX8Q7RTT4 187 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 MDP1Q86V88 176 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 CLVS1Q8IUQ0 354 aaPredicted RBP6.78□□□□□ -1.32
PNKP-229ENST00000637897 ZNF584Q8IVC4 421 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 FAM169BQ8N8A8 192 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 OR6S1Q8NH40 331 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 ZFAND2BQ8WV99 257 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 DNAJA4Q8WW22 397 aaPredicted RBP6.78□□□□□ -1.32
PNKP-229ENST00000637897 ACOT11Q8WXI4 607 aaPredicted RBP6.78□□□□□ -1.32
PNKP-229ENST00000637897 RORBQ92753 470 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 MUL1Q969V5 352 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 ISOC1Q96CN7 298 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 MS4A3Q96HJ5 214 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 Q96MT0 163 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 DOK1Q99704 481 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms