RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 APLNRP35414 380 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 NUDT6P53370 316 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 PCBD1P61457 104 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 RPS23P62266 143 aaKnown RBP12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 ADIPOQQ15848 244 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 ETFDHQ16134 617 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 MICAQ29983 383 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 PABPC1L2AQ5JQF8 200 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 CLEC12AQ5QGZ9 265 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 FAM27BQ5VT28 67 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 C11orf71Q6IPW1 123 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 LEG1Q6P5S2 330 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 DNM1P34Q6PK57 102 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 ZNF620Q6ZNG0 422 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 OR1J2Q8NGS2 313 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 ZNF75AQ96N20 296 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 FOXN4Q96NZ1 517 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 TMUB1Q9BVT8 246 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 PLK3Q9H4B4 646 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 EGLN3Q9H6Z9 239 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 ZNF442Q9H7R0 627 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 VNN3Q9NY84 501 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 SLC7A8Q9UHI5 535 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 GDF2Q9UK05 429 aaPredicted RBP12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 CMAHPQ9Y471 501 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 CDH10Q9Y6N8 788 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 C12orf71A8MTZ7 269 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 B9A039 149 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 IMPA2O14732 288 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 SSX4O60224 188 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 NDUFS7O75251 213 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 TXNDC12O95881 172 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 IGHV4-39P01824 125 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 CST2P09228 141 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 MMP7P09237 267 aaPredicted RBP12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 ZNF35P13682 527 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 CTLA4P16410 223 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 GSTM3P21266 225 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 CRABP1P29762 137 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 CDKN2AP42771 156 aaKnown RBP12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 GK3PQ14409 553 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 CLEC12BQ2HXU8 276 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 PTCHD4Q6ZW05 846 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 ZNF584Q8IVC4 421 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 ALDH16A1Q8IZ83 802 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 ICA1LQ8NDH6 482 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 OR10G2Q8NGC3 310 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 OR4K13Q8NH42 304 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 GIPC3Q8TF64 312 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 NMNAT3Q96T66 252 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 VRK1Q99986 396 aaPredicted RBP12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 BDH2Q9BUT1 245 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 OR51B6Q9H340 312 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 EMC7Q9NPA0 242 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 POLE4Q9NR33 117 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 TBC1D23Q9NUY8 699 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 VSX1Q9NZR4 365 aaPredicted RBP12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 POLR1DQ9Y2S0 133 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 TIMM10BQ9Y5J6 103 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 ACANP16112 2415 aa12.08□□□□□ -0.48
PCDHGC3-208ENST00000622836 TRIM64A6NGJ6 449 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 TRIM64BA6NI03 449 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 H7C417 338 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 SMAD7O15105 426 aaKnown RBP12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 ARPC3O15145 178 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 IDH3BO43837 385 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 FKBP6O75344 327 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 FAM157BP0CG42 384 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 HIST1H1CP16403 213 aaKnown RBP12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 STOMP27105 288 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 APEX1P27695 318 aaKnown RBP12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 CBX1P83916 185 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 SWI5Q1ZZU3 235 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 SLC35F1Q5T1Q4 408 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 C1orf146Q5VVC0 180 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 ZNF770Q6IQ21 691 aaPredicted RBP12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 RASSF6Q6ZTQ3 369 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 FOXL2NBQ6ZUU3 175 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 GLB1L2Q8IW92 636 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 SVOPLQ8N434 492 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 OR52E2Q8NGJ4 325 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 AKR7LQ8NHP1 331 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 ZNF416Q9BWM5 594 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 OR2H1Q9GZK4 316 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 NUAK2Q9H093 628 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 MMADHCQ9H3L0 296 aaPredicted RBP12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 DYNLRB1Q9NP97 96 aa12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 COA3Q9Y2R0 106 aaPredicted RBP12.07□□□□□ -0.48
PCDHGC3-208ENST00000622836 TCRBV3S1A0A5B6 114 aa12.06□□□□□ -0.48
PCDHGC3-208ENST00000622836 C5orf49A4QMS7 147 aa12.06□□□□□ -0.48
PCDHGC3-208ENST00000622836 H7C1Q1 480 aa12.06□□□□□ -0.48
PCDHGC3-208ENST00000622836 GPRIN2O60269 458 aa12.06□□□□□ -0.48
PCDHGC3-208ENST00000622836 CIB2O75838 187 aa12.06□□□□□ -0.48
PCDHGC3-208ENST00000622836 SOX14O95416 240 aa12.06□□□□□ -0.48
PCDHGC3-208ENST00000622836 LCKP06239 509 aa12.06□□□□□ -0.48
PCDHGC3-208ENST00000622836 ERCC1P07992 297 aaPredicted RBP12.06□□□□□ -0.48
PCDHGC3-208ENST00000622836 GLRXP35754 106 aa12.06□□□□□ -0.48
PCDHGC3-208ENST00000622836 GDI2P50395 445 aaKnown RBP12.06□□□□□ -0.48
PCDHGC3-208ENST00000622836 ARHGDIAP52565 204 aa12.06□□□□□ -0.48
PCDHGC3-208ENST00000622836 PSG4Q00888 419 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms