RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 UTP23Q9BRU9 249 aaKnown RBP14.24□□□□□ -0.13
NPHP4-211ENST00000622020 MRPS18BQ9Y676 258 aaKnown RBP14.24□□□□□ -0.13
NPHP4-211ENST00000622020 TMEM212A6NML5 194 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 B4DGG1 531 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 SOX1O00570 391 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-211ENST00000622020 HCRTR2O43614 444 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 CDC40O60508 579 aaKnown RBP eCLIP14.23□□□□□ -0.13
NPHP4-211ENST00000622020 RENP00797 406 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 AKR1D1P51857 326 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 PSMD4P55036 377 aaKnown RBP14.23□□□□□ -0.13
NPHP4-211ENST00000622020 SKP1P63208 163 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 WBP2NLQ6ICG8 309 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 OR52W1Q6IF63 320 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 RTL10Q7L3V2 364 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 LINC00518Q8N0U6 118 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 FAM160A2Q8N612 972 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-211ENST00000622020 GVQW1Q8N7I0 195 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 SEH1LQ96EE3 360 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 LRFN5Q96NI6 719 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 TMEM184BQ9Y519 407 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-211ENST00000622020 C2orf16Q68DN1 1984 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 CAPZA1P52907 286 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 DMRTC1Q5HYR2 192 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 CLVS2Q5SYC1 327 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 SHEQ5VZ18 495 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 ARMC6Q6NXE6 501 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 ATG4DQ86TL0 474 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-211ENST00000622020 MCATQ8IVS2 390 aaKnown RBP14.23□□□□□ -0.13
NPHP4-211ENST00000622020 BPIFB2Q8N4F0 458 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 LRRC75AQ8NAA5 344 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 VRK1Q99986 396 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-211ENST00000622020 TAS2R8Q9NYW2 309 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 MSRAQ9UJ68 235 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 LHX6Q9UPM6 363 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 PCNX3Q9H6A9 2034 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 RFPL4AA6NLU0 287 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 EEF1E1-BLOC1S5C9J1V9 151 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 RFPL4AL1F8VTS6 287 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 EIF1AYO14602 144 aaKnown RBP14.23□□□□□ -0.13
NPHP4-211ENST00000622020 XKRYO14609 159 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 CSRP1P21291 193 aaKnown RBP14.23□□□□□ -0.13
NPHP4-211ENST00000622020 VAMP1P23763 118 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 GPR3P46089 330 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 ATP1B3P54709 279 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 DHRS2Q13268 280 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 OR7A5Q15622 319 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 RTN4RL2Q86UN3 420 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 NAXDQ8IW45 347 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 ZNF595Q8IYB9 648 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 CYYR1Q96J86 154 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 CRISPLD2Q9H0B8 497 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 NXF5Q9H1B4 397 aaKnown RBP14.23□□□□□ -0.13
NPHP4-211ENST00000622020 ATXN7L1Q9ULK2 861 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-211ENST00000622020 PLCL2Q9UPR0 1127 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 DHDHQ9UQ10 334 aa14.23□□□□□ -0.13
NPHP4-211ENST00000622020 TRBV5-7A0A0A0MS05 114 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 LOC100289279A0A1B0GTE1 492 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 SCDO00767 359 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 RNH1P13489 461 aaKnown RBP14.22□□□□□ -0.13
NPHP4-211ENST00000622020 CSF2RBP32927 897 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 ADAM8P78325 824 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 EIF2B5Q13144 721 aaKnown RBP14.22□□□□□ -0.13
NPHP4-211ENST00000622020 CHST4Q8NCG5 386 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 OR6K3Q8NGY3 331 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 METTL21AQ8WXB1 218 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 MCHR2Q969V1 340 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 ELSPBP1Q96BH3 223 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 ZNF416Q9BWM5 594 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 MED12Q93074 2177 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 KANTRA0A1W2PQU2 76 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 C17orf105B2RV13 164 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 DNASE2O00115 360 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-211ENST00000622020 SRPX2O60687 465 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-211ENST00000622020 CYB5AP00167 134 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 F12P00748 615 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-211ENST00000622020 ASAH2BP0C7U1 165 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 CD34P28906 385 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 MECP2P51608 486 aaKnown RBP14.22□□□□□ -0.13
NPHP4-211ENST00000622020 HHEXQ03014 270 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 CDNFQ49AH0 187 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 ATPAF1Q5TC12 328 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-211ENST00000622020 HSD17B13Q7Z5P4 300 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-211ENST00000622020 C15orf40Q8WUR7 153 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 PPP1R1CQ8WVI7 109 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 SLC25A44Q96H78 314 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-211ENST00000622020 NPAS1Q99742 590 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 SLC6A7Q99884 636 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 MRI1Q9BV20 369 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 PCDHB16Q9NRJ7 776 aa14.22□□□□□ -0.13
NPHP4-211ENST00000622020 C13orf42A0A1B0GVH6 325 aa14.21□□□□□ -0.13
NPHP4-211ENST00000622020 GPR31O00270 319 aa14.21□□□□□ -0.13
NPHP4-211ENST00000622020 LINC01565O15544 149 aa14.21□□□□□ -0.13
NPHP4-211ENST00000622020 DCNP07585 359 aaKnown RBP14.21□□□□□ -0.13
NPHP4-211ENST00000622020 ZNF169Q14929 603 aaPredicted RBP14.21□□□□□ -0.13
NPHP4-211ENST00000622020 SMAD2Q15796 467 aaKnown RBP14.21□□□□□ -0.13
NPHP4-211ENST00000622020 KLHL26Q53HC5 615 aa14.21□□□□□ -0.13
NPHP4-211ENST00000622020 LINC00346Q8IVM7 164 aa14.21□□□□□ -0.13
NPHP4-211ENST00000622020 ZNF784Q8NCA9 323 aaPredicted RBP14.21□□□□□ -0.13
NPHP4-211ENST00000622020 PCOLCE2Q9UKZ9 415 aa14.21□□□□□ -0.13
NPHP4-211ENST00000622020 ZNF736B4DX44 427 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms