RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 CELSR3Q9NYQ7 3312 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 FREM3P0C091 2139 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 CDC14CA4D256 554 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 TMEM200CA6NKL6 621 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 GSTZ1O43708 216 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 FADS1O60427 444 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 OR2A4O95047 310 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 KNG1P01042 644 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 POU2F2P09086 479 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 GAAP10253 952 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 NID1P14543 1247 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 ZNF28P17035 718 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 KCNJ3P48549 501 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 EMDP50402 254 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 PLCXD2Q0VAA5 305 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 ARHGAP19Q14CB8 494 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 LPAL2Q16609 132 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 ADAMTSL4Q6UY14 1074 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 OVCH1Q7RTY7 1134 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 DPY19L4Q7Z388 723 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 LRRTM1Q86UE6 522 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 ZNF619Q8N2I2 560 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 SPICQ8N5J4 248 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 MFSD8Q8NHS3 518 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 PAQR8Q8TEZ7 354 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 RGP1Q92546 391 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 OR2A7Q96R45 310 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 INPP5EQ9NRR6 644 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 GLS2Q9UI32 602 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 KIR2DS5A0A0G2JLQ3 304 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 A0A0G2JNG1 304 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 CXorf51AA0A1B0GTR3 108 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 FITM1A5D6W6 292 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 H3BML4 177 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 KIR2DS3K7RE56 304 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 OGG1O15527 345 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 HSPA12AO43301 675 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 B3GALNT1O75752 331 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 TRAPPC6AO75865 159 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 HPP00738 406 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 CD34P28906 385 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 POU3F4P49335 361 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 RIDAP52758 137 aaKnown RBP6.32□□□□□ -1.4
NEDD9-216ENST00000620854 ADPRHP54922 357 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 RPS15AP62244 130 aaKnown RBP6.32□□□□□ -1.4
NEDD9-216ENST00000620854 RUNX2Q13950 521 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 KIR2DS5Q14953 304 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 RAB11BQ15907 218 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 TMEM196Q5HYL7 178 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 LRRC69Q6ZNQ3 347 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 GTPBP8Q8N3Z3 284 aaPredicted RBP6.32□□□□□ -1.4
NEDD9-216ENST00000620854 TEX19Q8NA77 164 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 OR4S1Q8NGB4 309 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 OR1S2Q8NGQ3 325 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 MAFIPQ8WZ33 124 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 ELF4Q99607 663 aaPredicted RBP6.32□□□□□ -1.4
NEDD9-216ENST00000620854 PELOQ9BRX2 385 aaKnown RBP6.32□□□□□ -1.4
NEDD9-216ENST00000620854 G6PC3Q9BUM1 346 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 TINAGL1Q9GZM7 467 aaPredicted RBP6.32□□□□□ -1.4
NEDD9-216ENST00000620854 EDARQ9UNE0 448 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 SLC6A5Q9Y345 797 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 A0A0A6YYH2 397 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 FAM221BA6H8Z2 402 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 NAP1L6A6NFF2 107 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 OR5H14A6NHG9 310 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 A6NJ64 397 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 F8W036 122 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 CT62P0C5K7 136 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 CPN1P15169 458 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 ZNF14P17017 642 aaPredicted RBP6.32□□□□□ -1.4
NEDD9-216ENST00000620854 SPI1P17947 270 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 AMY2BP19961 511 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 AKR1C3P42330 323 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 TRA2BP62995 288 aaKnown RBP6.32□□□□□ -1.4
NEDD9-216ENST00000620854 BLOC1S1P78537 153 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 DUSP8Q13202 625 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 ALG10Q5BKT4 473 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 MANEAQ5SRI9 462 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 TMEM164Q5U3C3 297 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 TMEM71Q6P5X7 295 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 DND1Q8IYX4 353 aaKnown RBP6.32□□□□□ -1.4
NEDD9-216ENST00000620854 CDRT4Q8N9R6 151 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 ZSCAN1Q8NBB4 408 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 FBXO17Q96EF6 278 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 LINC00615Q96LM1 132 aaPredicted RBP6.32□□□□□ -1.4
NEDD9-216ENST00000620854 VRK1Q99986 396 aaPredicted RBP6.32□□□□□ -1.4
NEDD9-216ENST00000620854 ALG12Q9BV10 488 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 EIF5A2Q9GZV4 153 aaKnown RBP6.32□□□□□ -1.4
NEDD9-216ENST00000620854 PRODH2Q9UF12 536 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 SERGEFQ9UGK8 458 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 PCDHB10Q9UN67 800 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 MRPS2Q9Y399 296 aaKnown RBP6.32□□□□□ -1.4
NEDD9-216ENST00000620854 PRELID3BQ9Y3B1 194 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 TSPAN11A1L157 253 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 C9J4A7 227 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 DCTN6O00399 190 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 SLC33A1O00400 549 aaPredicted RBP6.32□□□□□ -1.4
NEDD9-216ENST00000620854 TO15178 435 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 FGF17O60258 216 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 PTP4A3O75365 173 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms