RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 CCDC168Q8NDH2 2452 aa9.36□□□□□ -0.91
TARDBP-223ENST00000620632 FAM171A2A8MVW0 826 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 H3BN98 237 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 IDH3BO43837 385 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 MITFO75030 526 aaPredicted RBP9.35□□□□□ -0.91
TARDBP-223ENST00000620632 KHDRBS3O75525 346 aaKnown RBP9.35□□□□□ -0.91
TARDBP-223ENST00000620632 FARS2O95363 451 aaKnown RBP9.35□□□□□ -0.91
TARDBP-223ENST00000620632 CD8AP01732 235 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 CLUP10909 449 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 PSKH1P11801 424 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 FCGR1AP12314 374 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 CCL2P13500 99 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 ZNF35P13682 527 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 OSMP13725 252 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 ANXA8P13928 327 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 ZNF23P17027 643 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 ZNF32P17041 273 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 NOS3P29474 1203 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 GABPB1Q06547 395 aaPredicted RBP9.35□□□□□ -0.91
TARDBP-223ENST00000620632 CRMP1Q14194 572 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 MEP1BQ16820 701 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 FAM27BQ5VT28 67 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 TMEM236Q5W0B7 351 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 LYPD4Q6UWN0 246 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 ZBTB46Q86UZ6 589 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 JAZF1Q86VZ6 243 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 PAQR4Q8N4S7 273 aaPredicted RBP9.35□□□□□ -0.91
TARDBP-223ENST00000620632 ZNF611Q8N823 705 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 ATG16L2Q8NAA4 619 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 CPEB3Q8NE35 698 aaKnown RBP9.35□□□□□ -0.91
TARDBP-223ENST00000620632 OR2T33Q8NG76 320 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 AKR7LQ8NHP1 331 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 TEX47Q8TBZ9 253 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 NANOS1Q8WY41 292 aaKnown RBP9.35□□□□□ -0.91
TARDBP-223ENST00000620632 C11orf40Q8WZ69 217 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 FBXW5Q969U6 566 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 RADILQ96JH8 1075 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 RAB3IPQ96QF0 476 aaPredicted RBP9.35□□□□□ -0.91
TARDBP-223ENST00000620632 RBM4Q9BWF3 364 aaKnown RBP9.35□□□□□ -0.91
TARDBP-223ENST00000620632 ZNF416Q9BWM5 594 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 HCAR1Q9BXC0 346 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 GABARAPL1Q9H0R8 117 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 SRA1Q9HD15 236 aaKnown RBP9.35□□□□□ -0.91
TARDBP-223ENST00000620632 CISD1Q9NZ45 108 aaKnown RBP9.35□□□□□ -0.91
TARDBP-223ENST00000620632 TMEFF2Q9UIK5 374 aaPredicted RBP9.35□□□□□ -0.91
TARDBP-223ENST00000620632 OAZ3Q9UMX2 235 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 B9D1Q9UPM9 204 aa9.35□□□□□ -0.91
TARDBP-223ENST00000620632 SAC3D1A6NKF1 404 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 G3V2T6 193 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 RAB36O95755 333 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 RENP00797 406 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 SERPINA5P05154 406 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 CST2P09228 141 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 MSR1P21757 451 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 PAX7P23759 505 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 POU1F1P28069 291 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 EPHA2P29317 976 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 PYCR1P32322 319 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 CDK5Q00535 292 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 PSG4Q00888 419 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 KEAP1Q14145 624 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 ZSCAN26Q16670 478 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 MSMPQ1L6U9 139 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 SLC36A2Q495M3 483 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 PABPC1L2AQ5JQF8 200 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 KDM4DQ6B0I6 523 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 C20orf204Q6ZNR8 217 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 HIPK1Q86Z02 1210 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 ICA1LQ8NDH6 482 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 OR9Q1Q8NGQ5 310 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 SMAP2Q8WU79 429 aaPredicted RBP9.34□□□□□ -0.91
TARDBP-223ENST00000620632 NINJ1Q92982 152 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 CENPNQ96H22 339 aaPredicted RBP9.34□□□□□ -0.91
TARDBP-223ENST00000620632 CCL19Q99731 98 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 BDH2Q9BUT1 245 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 NMNAT2Q9BZQ4 307 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 RACGAP1Q9H0H5 632 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 WNT5BQ9H1J7 359 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 RNF121Q9H920 327 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 S100A14Q9HCY8 104 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 PAPOLBQ9NRJ5 636 aaKnown RBP9.34□□□□□ -0.91
TARDBP-223ENST00000620632 MRPL22Q9NWU5 206 aaKnown RBP9.34□□□□□ -0.91
TARDBP-223ENST00000620632 POU2F3Q9UKI9 436 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 ITGB1BP2Q9UKP3 347 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 BAIAP2Q9UQB8 552 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 FKBP7Q9Y680 259 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 ATP23Q9Y6H3 246 aa9.34□□□□□ -0.91
TARDBP-223ENST00000620632 LOC100509620A0A075B734 347 aa9.33□□□□□ -0.92
TARDBP-223ENST00000620632 FAM183AA6NL82 134 aa9.33□□□□□ -0.92
TARDBP-223ENST00000620632 CRYAAP02489 173 aa9.33□□□□□ -0.92
TARDBP-223ENST00000620632 TFP02787 698 aa9.33□□□□□ -0.92
TARDBP-223ENST00000620632 GYPBP06028 91 aa9.33□□□□□ -0.92
TARDBP-223ENST00000620632 DNASE1P24855 282 aa9.33□□□□□ -0.92
TARDBP-223ENST00000620632 APEX1P27695 318 aaKnown RBP9.33□□□□□ -0.92
TARDBP-223ENST00000620632 CRABP1P29762 137 aa9.33□□□□□ -0.92
TARDBP-223ENST00000620632 GRK5P34947 590 aa9.33□□□□□ -0.92
TARDBP-223ENST00000620632 ARHGDIAP52565 204 aa9.33□□□□□ -0.92
TARDBP-223ENST00000620632 NKX6-1P78426 367 aaPredicted RBP9.33□□□□□ -0.92
TARDBP-223ENST00000620632 PPP2R2BQ00005 443 aa9.33□□□□□ -0.92
TARDBP-223ENST00000620632 GINS1Q14691 196 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms