RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	FAM3D	Q96BQ1	224 aa		10.07	□□□□□ -0.8
TP53-223	ENST00000618944	SLC41A2	Q96JW4	573 aa		10.07	□□□□□ -0.8
TP53-223	ENST00000618944	SORCS2	Q96PQ0	1159 aa		10.07	□□□□□ -0.8
TP53-223	ENST00000618944	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.07	□□□□□ -0.8
TP53-223	ENST00000618944	ZNF275	Q9NSD4	429 aa	Predicted RBP	10.07	□□□□□ -0.8
TP53-223	ENST00000618944	TAS2R4	Q9NYW5	299 aa		10.07	□□□□□ -0.8
TP53-223	ENST00000618944	SUSD2	Q9UGT4	822 aa		10.07	□□□□□ -0.8
TP53-223	ENST00000618944	PPIE	Q9UNP9	301 aa	Known RBP	10.07	□□□□□ -0.8
TP53-223	ENST00000618944	DHDH	Q9UQ10	334 aa		10.07	□□□□□ -0.8
TP53-223	ENST00000618944	EMC9	Q9Y3B6	208 aa		10.07	□□□□□ -0.8
TP53-223	ENST00000618944	LRP12	Q9Y561	859 aa		10.07	□□□□□ -0.8
TP53-223	ENST00000618944		A0A1B0GTQ1	180 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944		A0A1B0GUH1	482 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	DCDC2B	A2VCK2	349 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	LEUTX	A8MZ59	168 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	EIF1AY	O14602	144 aa	Known RBP	10.06	□□□□□ -0.8
TP53-223	ENST00000618944	SCO1	O75880	301 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	IFNGR1	P15260	489 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	RIDA	P52758	137 aa	Known RBP	10.06	□□□□□ -0.8
TP53-223	ENST00000618944	UBE2M	P61081	183 aa	Known RBP	10.06	□□□□□ -0.8
TP53-223	ENST00000618944	TSPAN5	P62079	268 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	MRPS10	P82664	201 aa	Known RBP	10.06	□□□□□ -0.8
TP53-223	ENST00000618944	OC90	Q02509	493 aa	Predicted RBP	10.06	□□□□□ -0.8
TP53-223	ENST00000618944	OLFML2A	Q68BL7	652 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	BPHL	Q86WA6	291 aa	Predicted RBP	10.06	□□□□□ -0.8
TP53-223	ENST00000618944	ZNF248	Q8NDW4	579 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	ASB17	Q8WXJ9	295 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	GINS4	Q9BRT9	223 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	TTYH1	Q9H313	450 aa	Predicted RBP	10.06	□□□□□ -0.8
TP53-223	ENST00000618944	DIABLO	Q9NR28	239 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	VSX1	Q9NZR4	365 aa	Predicted RBP	10.06	□□□□□ -0.8
TP53-223	ENST00000618944	CGGBP1	Q9UFW8	167 aa	Predicted RBP	10.06	□□□□□ -0.8
TP53-223	ENST00000618944	MS4A18	H0YCH9	400 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944		H7C417	338 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	PRAF2	O60831	178 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	NDUFB6	O95139	128 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	SIX6	O95475	246 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	CFD	P00746	253 aa	Predicted RBP	10.06	□□□□□ -0.8
TP53-223	ENST00000618944	VSIG10L2	P0DP72	767 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	GTF2F2	P13984	249 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	ARRB1	P49407	418 aa	Predicted RBP	10.06	□□□□□ -0.8
TP53-223	ENST00000618944	SMAD2	Q15796	467 aa	Known RBP	10.06	□□□□□ -0.8
TP53-223	ENST00000618944	MS4A18	Q3C1V0	323 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	TEX30	Q5JUR7	227 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	GLYATL3	Q5SZD4	288 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	SIGIRR	Q6IA17	410 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	KCTD18	Q6PI47	426 aa	Predicted RBP	10.06	□□□□□ -0.8
TP53-223	ENST00000618944	TMEM205	Q6UW68	189 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	NHLRC1	Q6VVB1	395 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	OR4C16	Q8NGL9	310 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	ASB5	Q8WWX0	329 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	ZMAT3	Q9HA38	289 aa	Known RBP	10.06	□□□□□ -0.8
TP53-223	ENST00000618944	MED29	Q9NX70	200 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	MTFP1	Q9UDX5	166 aa		10.06	□□□□□ -0.8
TP53-223	ENST00000618944	IGKV1D-43	A0A0B4J1Z2	117 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944		H3BML4	177 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	ADAM10	O14672	748 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	BCAT2	O15382	392 aa	Predicted RBP	10.05	□□□□□ -0.8
TP53-223	ENST00000618944	CREBL2	O60519	120 aa	Predicted RBP	10.05	□□□□□ -0.8
TP53-223	ENST00000618944	LMX1B	O60663	402 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	TMEM127	O75204	238 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	LDOC1	O95751	146 aa	Predicted RBP	10.05	□□□□□ -0.8
TP53-223	ENST00000618944	HRG	P04196	525 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	GIMD1	P0DJR0	217 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	ENPP1	P22413	925 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	GLO1	Q04760	184 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	SPOCK1	Q08629	439 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	SNTA1	Q13424	505 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	TMEM225	Q6GV28	225 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	OR10K2	Q6IF99	312 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	COX15	Q7KZN9	410 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	DCXR	Q7Z4W1	244 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	FAM109A	Q8N4B1	249 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	OR51A2	Q8NGJ7	313 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	OR1J4	Q8NGS1	313 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	EMC6	Q9BV81	110 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	CLEC4M	Q9H2X3	399 aa	Predicted RBP	10.05	□□□□□ -0.8
TP53-223	ENST00000618944	CENPM	Q9NSP4	180 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	B3GNT2	Q9NY97	397 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	PIPOX	Q9P0Z9	390 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	NPTN	Q9Y639	398 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	TMEM272	A0A1B0GTI8	110 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	LOC101059948	A0A1B0GTJ6	334 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	CIB4	A0PJX0	185 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	CPED1	A4D0V7	1026 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	OR6C76	A6NM76	312 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	TIAF1	O95411	115 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	CD3D	P04234	171 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	HEXB	P07686	556 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	ZNF823	P16415	610 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	EIF1AX	P47813	144 aa	Known RBP	10.05	□□□□□ -0.8
TP53-223	ENST00000618944	SLC26A5	P58743	744 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	PUDP	Q08623	228 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	SMAD4	Q13485	552 aa	Known RBP	10.05	□□□□□ -0.8
TP53-223	ENST00000618944	EXOSC2	Q13868	293 aa	Known RBP	10.05	□□□□□ -0.8
TP53-223	ENST00000618944	GRK1	Q15835	563 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	CSRP2	Q16527	193 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	FDX2	Q6P4F2	183 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	SEZ6L2	Q6UXD5	910 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	ZNF627	Q7L945	461 aa		10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms