RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 SLC25A15Q9Y619 301 aa15.31■□□□□ 0.04
TRAPPC3-209ENST00000616395 E9PQ18 207 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 KPNA4O00629 521 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 NOL3O60936 208 aaKnown RBP15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 RAD51DO75771 328 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 RGS9O75916 674 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 SLC6A6P31641 620 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 APOBEC3AP31941 199 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 CDK5Q00535 292 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 MVKQ03426 396 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 APOFQ13790 326 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 SMARCD3Q6STE5 483 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 LINC00114Q6XXX2 140 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 ZNF620Q6ZNG0 422 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 GRINAQ7Z429 371 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 C10orf53Q8N6V4 93 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 CNIH3Q8TBE1 160 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 FBXO17Q96EF6 278 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 ZNF426Q9BUY5 554 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 CCDC90BQ9GZT6 254 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 TVP23BQ9NYZ1 205 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 KLHL9Q9P2J3 617 aa15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 RPL36Q9Y3U8 105 aaKnown RBP15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 SPIN1Q9Y657 262 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC3-209ENST00000616395 PTGES3LE9PB15 166 aa15.29■□□□□ 0.04
TRAPPC3-209ENST00000616395 RGS10O43665 173 aa15.29■□□□□ 0.04
TRAPPC3-209ENST00000616395 LYPD3O95274 346 aa15.29■□□□□ 0.04
TRAPPC3-209ENST00000616395 IFNGP01579 166 aa15.29■□□□□ 0.04
TRAPPC3-209ENST00000616395 THY1P04216 161 aa15.29■□□□□ 0.04
TRAPPC3-209ENST00000616395 FKBP2P26885 142 aaKnown RBP15.29■□□□□ 0.04
TRAPPC3-209ENST00000616395 GRK5P34947 590 aa15.29■□□□□ 0.04
TRAPPC3-209ENST00000616395 SWI5Q1ZZU3 235 aa15.29■□□□□ 0.04
TRAPPC3-209ENST00000616395 TMEM176BQ3YBM2 270 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC3-209ENST00000616395 STX19Q8N4C7 294 aa15.29■□□□□ 0.04
TRAPPC3-209ENST00000616395 LINC01356Q8N9X3 169 aa15.29■□□□□ 0.04
TRAPPC3-209ENST00000616395 FAM216AQ8WUB2 273 aa15.29■□□□□ 0.04
TRAPPC3-209ENST00000616395 DNAJA3Q96EY1 480 aa15.29■□□□□ 0.04
TRAPPC3-209ENST00000616395 MYOZ1Q9NP98 299 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC3-209ENST00000616395 SERINC1Q9NRX5 453 aa15.29■□□□□ 0.04
TRAPPC3-209ENST00000616395 PCDHGB5Q9Y5G0 923 aa15.29■□□□□ 0.04
TRAPPC3-209ENST00000616395 A6NHS1 94 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 PIP5K1CO60331 668 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 NDUFB2O95178 105 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 SMIM18P0DKX4 95 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 PAICSP22234 425 aaKnown RBP15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 APEX1P27695 318 aaKnown RBP15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 EPHA2P29317 976 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 TACR3P29371 465 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 FMO3P31513 532 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 APOBEC1P41238 236 aaKnown RBP15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 EIF1P41567 113 aaKnown RBP15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 PRPS1P60891 318 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 LGALS3BPQ08380 585 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 MFSD13AQ14CX5 517 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 OCLNQ16625 522 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 ZBED5Q49AG3 693 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 GPR141Q7Z602 305 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 ZNF100Q8IYN0 542 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 PFN4Q8NHR9 129 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 OR52D1Q9H346 318 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 FKRPQ9H9S5 495 aa15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 CNOT2Q9NZN8 540 aaKnown RBP15.28■□□□□ 0.04
TRAPPC3-209ENST00000616395 A0A1W2PNR3 127 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 CIB4A0PJX0 185 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 DPPA5A6NC42 116 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 TMPRSS2O15393 492 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 OR2T1O43869 369 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 OR7A10O76100 309 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 IGHV3-9P01782 118 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 NOS3P29474 1203 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 RASGEF1BQ0VAM2 473 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 KLHL22Q53GT1 634 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 SLC25A30Q5SVS4 291 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 TMEM236Q5W0B7 351 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 PEG10Q86TG7 708 aaKnown RBP15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 TCEANCQ8N8B7 351 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 TMEM163Q8TC26 289 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 FCGR1BQ92637 280 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 MRGPRX4Q96LA9 322 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 VRK1Q99986 396 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 COPS4Q9BT78 406 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 IFT27Q9BW83 186 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 EGLN3Q9H6Z9 239 aa15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.27■□□□□ 0.04
TRAPPC3-209ENST00000616395 CCDC160A6NGH7 325 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 TRIM64CA6NLI5 447 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 GJE1A6NN92 205 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 RIIAD1A6NNX1 92 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 AHSA1O95433 338 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 MT-ATP6P00846 226 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 FUT1P19526 365 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 FUT4P22083 530 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 CDH15P55291 814 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 SELENBP1Q13228 472 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 SLC25A53Q5H9E4 307 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 WDR88Q6ZMY6 472 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 KCTD8Q6ZWB6 473 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 PRSS48Q7RTY5 328 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 UBE2J2Q8N2K1 259 aa15.26■□□□□ 0.03
TRAPPC3-209ENST00000616395 STK35Q8TDR2 534 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms